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通过中国和欧洲人群的跨种族荟萃分析发现与单不饱和脂肪酸相关的基因座并进行精细定位。

Discovery and fine-mapping of loci associated with MUFAs through trans-ethnic meta-analysis in Chinese and European populations.

作者信息

Hu Yao, Tanaka Toshiko, Zhu Jingwen, Guan Weihua, Wu Jason H Y, Psaty Bruce M, McKnight Barbara, King Irena B, Sun Qi, Richard Melissa, Manichaikul Ani, Frazier-Wood Alexis C, Kabagambe Edmond K, Hopkins Paul N, Ordovas Jose M, Ferrucci Luigi, Bandinelli Stefania, Arnett Donna K, Chen Yii-Der I, Liang Shuang, Siscovick David S, Tsai Michael Y, Rich Stephen S, Fornage Myriam, Hu Frank B, Rimm Eric B, Jensen Majken K, Lemaitre Rozenn N, Mozaffarian Dariush, Steffen Lyn M, Morris Andrew P, Li Huaixing, Lin Xu

机构信息

The Key Laboratory of Nutrition and Metabolism, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, University of the Chinese Academy of Sciences, Shanghai, People's Republic of China.

Translational Gerontology Branch, National Institute on Aging, Baltimore, MD.

出版信息

J Lipid Res. 2017 May;58(5):974-981. doi: 10.1194/jlr.P071860. Epub 2017 Mar 15.

Abstract

MUFAs are unsaturated FAs with one double bond and are derived from endogenous synthesis and dietary intake. Accumulating evidence has suggested that plasma and erythrocyte MUFA levels are associated with cardiometabolic disorders, including CVD, T2D, and metabolic syndrome (MS). Previous genome-wide association studies (GWASs) have identified seven loci for plasma and erythrocyte palmitoleic and oleic acid levels in populations of European origin. To identify additional MUFA-associated loci and the potential functional variant at each locus, we performed ethnic-specific GWAS meta-analyses and trans-ethnic meta-analyses in more than 15,000 participants of Chinese and European ancestry. We identified novel genome-wide significant associations for vaccenic acid at and [log(Bayes factor) ≥ 8.07] and for gondoic acid at and [log(Bayes factor) ≥ 6.22], and also observed improved fine-mapping resolutions at and loci. The greatest improvement was observed at , where the number of variants in the 99% credible set was reduced from 16 (covering 94.8 kb) to 5 (covering 19.6 kb, including a missense variant rs1260326) after trans-ethnic meta-analysis. We also confirmed the previously reported associations of , , , and with palmitoleic acid and of and with oleic acid in the Chinese-specific GWAS and the trans-ethnic meta-analyses. Pathway-based analyses suggested that the identified loci were in unsaturated FA metabolism and signaling pathways. Our findings provide novel insight into the genetic basis relevant to MUFA metabolism and biology.

摘要

单不饱和脂肪酸(MUFAs)是含有一个双键的不饱和脂肪酸,来源于内源性合成和饮食摄入。越来越多的证据表明,血浆和红细胞中的MUFA水平与心脏代谢紊乱有关,包括心血管疾病(CVD)、2型糖尿病(T2D)和代谢综合征(MS)。此前的全基因组关联研究(GWAS)已在欧洲血统人群中确定了7个与血浆和红细胞棕榈油酸及油酸水平相关的基因座。为了确定其他与MUFA相关的基因座以及每个基因座的潜在功能变异,我们对超过15000名具有中国和欧洲血统的参与者进行了种族特异性GWAS荟萃分析和跨种族荟萃分析。我们确定了在[具体位置1]和[具体位置2]处反式vaccenic酸[对数贝叶斯因子≥8.07]以及在[具体位置3]和[具体位置4]处神经酸[对数贝叶斯因子≥6.22]的全基因组显著关联,并且还观察到在[具体位置5]和[具体位置6]基因座处精细定位分辨率有所提高。在[具体位置7]观察到最大的改进,跨种族荟萃分析后,99%可信集中的变异数量从16个(覆盖94.8 kb)减少到5个(覆盖19.6 kb,包括一个错义变异rs1260326)。我们还在特定于中国人群的GWAS和跨种族荟萃分析中证实了先前报道的[基因座1]、[基因座2]、[基因座3]和[基因座4]与棕榈油酸的关联以及[基因座5]和[基因座6]与油酸的关联。基于通路的分析表明,所确定的基因座参与不饱和脂肪酸代谢和信号通路。我们的研究结果为与MUFA代谢和生物学相关的遗传基础提供了新的见解。

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