Division of Life Science and Division of Biomedical Engineering, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, China; email:
School of Life Sciences and Center for Life Sciences, Tsinghua University, Beijing 100084, China; email:
Annu Rev Anal Chem (Palo Alto Calif). 2017 Jun 12;10(1):439-462. doi: 10.1146/annurev-anchem-061516-045228. Epub 2017 Mar 16.
Despite being a relatively recent technological development, single-cell transcriptional analysis through high-throughput sequencing has already been used in hundreds of fruitful studies to make exciting new biological discoveries that would otherwise be challenging or even impossible. Consequently, this has fueled a virtuous cycle of even greater interest in the field and compelled development of further improved technical methodologies and approaches. Thanks to the combined efforts of the research community, including the fields of biochemistry and molecular biology, technology and instrumentation, data science, computational biology, and bioinformatics, the single-cell RNA-sequencing field is advancing at a pace that is both astounding and unprecedented. In this review, we provide a broad introduction to this revolutionary technology by presenting the state-of-the-art in sample preparation methodologies, technology platforms, and computational analysis methods, while highlighting the key considerations for designing, executing, and interpreting a study using single-cell RNA sequencing.
尽管单细胞转录组分析技术是一种相对较新的技术手段,但通过高通量测序已经在数百项富有成效的研究中得到了应用,这些研究取得了令人兴奋的新生物学发现,否则这些发现可能具有挑战性,甚至是不可能的。因此,这激发了人们对该领域更大的兴趣,并促使进一步改进技术方法和途径的发展。由于研究界的共同努力,包括生物化学和分子生物学、技术和仪器、数据科学、计算生物学和生物信息学等领域,单细胞 RNA 测序领域正在以前所未有的惊人速度发展。在这篇综述中,我们通过介绍样品制备方法、技术平台和计算分析方法的最新进展,广泛介绍了这项革命性技术,同时强调了使用单细胞 RNA 测序进行设计、执行和解释研究的关键考虑因素。