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使用新型自动核糖基化检测方法鉴定PARP14抑制剂。

Identification of PARP14 inhibitors using novel methods for detecting auto-ribosylation.

作者信息

Yoneyama-Hirozane Mariko, Matsumoto Shin-Ichi, Toyoda Yukio, Saikatendu Kumar Singh, Zama Yumi, Yonemori Kazuko, Oonishi Motomi, Ishii Tsuyoshi, Kawamoto Tomohiro

机构信息

Pharmaceutical Research Division, Takeda Pharmaceutical Company Limited, 26-1, Muraoka-Higashi 2-chome, Fujisawa, Kanagawa 251-8555, Japan.

Pharmaceutical Research Division, Takeda Pharmaceutical Company Limited, 26-1, Muraoka-Higashi 2-chome, Fujisawa, Kanagawa 251-8555, Japan.

出版信息

Biochem Biophys Res Commun. 2017 May 6;486(3):626-631. doi: 10.1016/j.bbrc.2017.03.052. Epub 2017 Mar 14.

Abstract

Poly(ADP-ribose) polymerases (PARPs) use nicotinamide adenine dinucleotide (NAD) as a co-substrate to transfer ADP-ribose when it releases nicotinamide as the metabolized product. Enzymes of the PARP family play key roles in detecting and repairing DNA, modifying chromatin, regulating transcription, controlling energy metabolism, and inducing cell death. PARP14, the original member of the PARP family, has been reported to be associated with the development of inflammatory diseases and various cancer types, making it a potential therapeutic target. In this study, we purified the macrodomain-containing PARP14 enzyme and established an assay for detecting the auto-ribosylation activity of PARP14 using RapidFire high-throughput mass spectrometry and immunoradiometric assay using [H]NAD. Subsequently, we performed high-throughput screening using the assays and identified small-molecule hit compounds, which showed NAD-competitive and PARP14-selective inhibitory activities. Co-crystal structures of PARP14 with certain hit compounds revealed that the inhibitors bind to the NAD-binding site. Finally, we confirmed that the hit compounds interacted with intracellular PARP14 by a cell-based protein stabilization assay. Thus, we successfully identified primary candidate compounds for further investigation.

摘要

聚(ADP - 核糖)聚合酶(PARPs)利用烟酰胺腺嘌呤二核苷酸(NAD)作为共底物,在释放烟酰胺作为代谢产物时转移ADP - 核糖。PARP家族的酶在检测和修复DNA、修饰染色质、调节转录、控制能量代谢以及诱导细胞死亡中发挥关键作用。PARP14作为PARP家族的原始成员,已被报道与炎症性疾病和多种癌症类型的发展相关,使其成为一个潜在的治疗靶点。在本研究中,我们纯化了含macrodomain的PARP14酶,并使用RapidFire高通量质谱和使用[H]NAD的免疫放射分析建立了检测PARP14自身核糖基化活性的方法。随后,我们使用这些方法进行高通量筛选并鉴定出小分子命中化合物,这些化合物表现化合物表现出NAD竞争性和PARP14选择性抑制活性。PARP14与某些命中化合物的共晶体结构表明抑制剂结合到NAD结合位点。最后,我们通过基于细胞的蛋白质稳定分析证实命中化合物与细胞内PARP14相互作用。因此,我们成功鉴定出用于进一步研究的主要候选化合物。

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