Kochat Veena, Equbal Zaffar, Baligar Prakash, Kumar Vikash, Srivastava Madhulika, Mukhopadhyay Asok
Stem Cell Biology Laboratory, National Institute of Immunology, New Delhi, India.
Epigenetic Regulation Research Laboratory, National Institute of Immunology, New Delhi, India.
PLoS One. 2017 Mar 22;12(3):e0173977. doi: 10.1371/journal.pone.0173977. eCollection 2017.
The strictly regulated unidirectional differentiation program in some somatic stem/progenitor cells has been found to be modified in the ectopic site (tissue) undergoing regeneration. In these cases, the lineage barrier is crossed by either heterotypic cell fusion or direct differentiation. Though studies have shown the role of coordinated genetic and epigenetic mechanisms in cellular development and differentiation, how the lineage fate of adult bone marrow progenitor cells (BMPCs) is reprogrammed during liver regeneration and whether this lineage switch is stably maintained are not clearly understood. In the present study, we wanted to decipher genetic and epigenetic mechanisms that involve in lineage reprogramming of BMPCs into hepatocyte-like cells. Here we report dynamic transcriptional change during cellular reprogramming of BMPCs to hepatocytes and dissect the epigenetic switch mechanism of BM cell-mediated liver regeneration after acute injury. Genome-wide gene expression analysis in BM-derived hepatocytes, isolated after 1 month and 5 months of transplantation, showed induction of hepatic transcriptional program and diminishing of donor signatures over the time. The transcriptional reprogramming of BM-derived cells was found to be the result of enrichment of activating marks (H3K4me3 and H3K9Ac) and loss of repressive marks (H3K27me3 and H3K9me3) at the promoters of hepatic transcription factors (HTFs). Further analyses showed that BMPCs possess bivalent histone marks (H3K4me3 and H3K27me3) at the promoters of crucial HTFs. H3K27 methylation dynamics at the HTFs was antagonistically regulated by EZH2 and JMJD3. Preliminary evidence suggests a role of JMJD3 in removal of H3K27me3 mark from promoters of HTFs, thus activating epigenetically poised hepatic genes in BMPCs prior to partial nuclear reprogramming. The importance of JMJD3 in reprogramming of BMPCs to hepatic phenotype was confirmed by inhibiting catalytic function of the enzyme using small molecule GSK-J4. Our results propose a potential role of JMJD3 in lineage conversion of BM cells into hepatic lineage.
在某些体细胞干/祖细胞中,严格调控的单向分化程序在经历再生的异位部位(组织)发生了改变。在这些情况下,谱系屏障通过异型细胞融合或直接分化得以跨越。尽管研究已经表明了协调的遗传和表观遗传机制在细胞发育和分化中的作用,但成人骨髓祖细胞(BMPC)在肝脏再生过程中谱系命运是如何重编程的,以及这种谱系转换是否能稳定维持,目前尚不清楚。在本研究中,我们想要破解参与BMPC重编程为肝细胞样细胞的遗传和表观遗传机制。在此,我们报告了BMPC重编程为肝细胞过程中的动态转录变化,并剖析了急性损伤后BM细胞介导的肝脏再生的表观遗传开关机制。对移植1个月和5个月后分离的BM来源肝细胞进行全基因组基因表达分析,结果显示随着时间推移,肝脏转录程序被诱导,供体特征逐渐消失。发现BM来源细胞的转录重编程是由于肝脏转录因子(HTF)启动子处激活标记(H3K4me3和H3K9Ac)富集以及抑制标记(H3K27me3和H.K9me3)缺失所致。进一步分析表明,BMPC在关键HTF的启动子处具有双价组蛋白标记(H3K4me3和H3K27me3)。HTF处的H3K27甲基化动态受到EZH2和JMJD3的拮抗调节。初步证据表明JMJD3在从HTF启动子去除H3K27me3标记中发挥作用,从而在部分细胞核重编程之前表观遗传激活BMPC中处于就绪状态的肝脏基因。通过使用小分子GSK-J4抑制该酶的催化功能,证实了JMJD3在BMPC重编程为肝脏表型中的重要性。我们的结果表明JMJD3在BM细胞向肝脏谱系的谱系转换中具有潜在作用。