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脂联素受体的结构见解提示神经酰胺酶活性。

Structural insights into adiponectin receptors suggest ceramidase activity.

作者信息

Vasiliauskaité-Brooks Ieva, Sounier Remy, Rochaix Pascal, Bellot Gaëtan, Fortier Mathieu, Hoh François, De Colibus Luigi, Bechara Chérine, Saied Essa M, Arenz Christoph, Leyrat Cédric, Granier Sébastien

机构信息

Institut de Génomique Fonctionnelle, CNRS UMR-5203 INSERM U1191, University of Montpellier, 34094 Montpellier, France.

Centre de Biochimie Structurale, CNRS UMR 5048-INSERM 1054 University of Montpellier, 29 rue de Navacelles, 34090 Montpellier Cedex, France.

出版信息

Nature. 2017 Apr 6;544(7648):120-123. doi: 10.1038/nature21714. Epub 2017 Mar 22.

Abstract

Adiponectin receptors (ADIPORs) are integral membrane proteins that control glucose and lipid metabolism by mediating, at least in part, a cellular ceramidase activity that catalyses the hydrolysis of ceramide to produce sphingosine and a free fatty acid (FFA). The crystal structures of the two receptor subtypes, ADIPOR1 and ADIPOR2, show a similar overall seven-transmembrane-domain architecture with large unoccupied cavities and a zinc binding site within the seven transmembrane domain. However, the molecular mechanisms by which ADIPORs function are not known. Here we describe the crystal structure of ADIPOR2 bound to a FFA molecule and show that ADIPOR2 possesses intrinsic basal ceramidase activity that is enhanced by adiponectin. We also identify a ceramide binding pose and propose a possible mechanism for the hydrolytic activity of ADIPOR2 using computational approaches. In molecular dynamics simulations, the side chains of residues coordinating the zinc rearrange quickly to promote the nucleophilic attack of a zinc-bound hydroxide ion onto the ceramide amide carbonyl. Furthermore, we present a revised ADIPOR1 crystal structure exhibiting a seven-transmembrane-domain architecture that is clearly distinct from that of ADIPOR2. In this structure, no FFA is observed and the ceramide binding pocket and putative zinc catalytic site are exposed to the inner membrane leaflet. ADIPOR1 also possesses intrinsic ceramidase activity, so we suspect that the two distinct structures may represent key steps in the enzymatic activity of ADIPORs. The ceramidase activity is low, however, and further studies will be required to characterize fully the enzymatic parameters and substrate specificity of ADIPORs. These insights into ADIPOR function will enable the structure-based design of potent modulators of these clinically relevant enzymes.

摘要

脂联素受体(ADIPORs)是整合膜蛋白,至少部分地通过介导一种细胞神经酰胺酶活性来控制葡萄糖和脂质代谢,该活性催化神经酰胺水解产生鞘氨醇和游离脂肪酸(FFA)。两种受体亚型ADIPOR1和ADIPOR2的晶体结构显示出相似的整体七跨膜结构域架构,有大的未占据腔和七跨膜结构域内的锌结合位点。然而,ADIPORs发挥功能的分子机制尚不清楚。在这里,我们描述了与FFA分子结合的ADIPOR2的晶体结构,并表明ADIPOR2具有内在的基础神经酰胺酶活性,脂联素可增强该活性。我们还确定了一种神经酰胺结合构象,并使用计算方法提出了ADIPOR2水解活性的可能机制。在分子动力学模拟中,与锌配位的残基侧链迅速重排,以促进锌结合的氢氧根离子对神经酰胺酰胺羰基的亲核攻击。此外,我们展示了一种经过修订的ADIPOR1晶体结构,其呈现出与ADIPOR2明显不同的七跨膜结构域架构。在该结构中,未观察到FFA,神经酰胺结合口袋和假定的锌催化位点暴露于内膜小叶。ADIPOR1也具有内在的神经酰胺酶活性,因此我们怀疑这两种不同的结构可能代表了ADIPORs酶活性的关键步骤。然而,神经酰胺酶活性较低,需要进一步研究以全面表征ADIPORs的酶学参数和底物特异性。这些对ADIPOR功能的见解将有助于基于结构设计这些临床相关酶的有效调节剂。

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