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基于蛋白质芯片技术检测膜性肾病患者肾组织中的蛋白质

Protein Array-Based Detection of Proteins in Kidney Tissues from Patients with Membranous Nephropathy.

作者信息

Wang Shuqiang, Lu Yang, Hong Quan, Geng Xiaodong, Wang Xu, Zheng Wei, Song Chengcheng, Liu Chunling, Fan Meng, Xi Yue, Guo Mandi, Wu Di

机构信息

Department of Nephrology, PLA General Hospital, Institute of Nephrology, Beijing Key Laboratory of Kidney Disease, State Key Laboratory of Kidney Diseases, National Clinical Research Center for Kidney Diseases, Beijing 100853, China.

出版信息

Biomed Res Int. 2017;2017:7843584. doi: 10.1155/2017/7843584. Epub 2017 Feb 27.

Abstract

Membranous nephropathy (MN) is an autoimmune inflammatory disease in which proteins related with plenty of biological processes play an important role. However, the role of these proteins in the pathogenesis of MN is still unclear. This study aimed to screen differential proteins in kidney tissue samples from MN patients by using protein arrays and determine the pathways involved in the pathogenesis of MN. This study first tested a quantitative protein array (QAH-INF-3) and two semiquantitative protein arrays (L-493 and L-507) with normal renal tissue and identified L-493 as the most appropriate assay to compare protein levels between MN tissues and normal control tissues. The L-493 array identified 66 differentially expressed proteins (DEPs) that may be associated with MN. The gene oncology (GO) and protein-protein interaction (PPI) analyses revealed several processes potentially involved in MN, including extracellular matrix disassembly and organization, cell adhesion, cell-cell signaling, cellular protein metabolic process, and immune response ( < 0.05). We suggest that these different pathways work together via protein signaling and result in the pathogenesis and progression of MN.

摘要

膜性肾病(MN)是一种自身免疫性炎症性疾病,其中与众多生物学过程相关的蛋白质发挥着重要作用。然而,这些蛋白质在MN发病机制中的作用仍不清楚。本研究旨在通过蛋白质芯片筛选MN患者肾组织样本中的差异蛋白质,并确定MN发病机制中涉及的通路。本研究首先用正常肾组织检测了一种定量蛋白质芯片(QAH-INF-3)和两种半定量蛋白质芯片(L-493和L-507),并确定L-493是比较MN组织和正常对照组织蛋白质水平的最合适检测方法。L-493芯片鉴定出66种可能与MN相关的差异表达蛋白质(DEP)。基因本体论(GO)和蛋白质-蛋白质相互作用(PPI)分析揭示了几个可能参与MN的过程,包括细胞外基质分解和组织、细胞黏附、细胞间信号传导、细胞蛋白质代谢过程和免疫反应(<0.05)。我们认为这些不同的通路通过蛋白质信号共同作用,导致MN的发病机制和进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd63/5350302/4134e2b26520/BMRI2017-7843584.001.jpg

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