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相似却又不同:古菌及其真核后代中TBP的进化

Same same but different: The evolution of TBP in archaea and their eukaryotic offspring.

作者信息

Blombach Fabian, Grohmann Dina

机构信息

a RNAP Laboratory , University College London, Institute of Structural and Molecular Biology, Division of Biosciences , London , UK.

b Department of Biochemistry, Genetics and Microbiology , Institute of Microbiology, University of Regensburg , Regensburg , Germany.

出版信息

Transcription. 2017 May 27;8(3):162-168. doi: 10.1080/21541264.2017.1289879. Epub 2017 Feb 8.

DOI:10.1080/21541264.2017.1289879
PMID:28340330
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5501381/
Abstract

Transcription factors TBP and TF(II)B assemble with RNA polymerase at the promoter DNA forming the initiation complex. Despite a high degree of conservation, the molecular binding mechanisms of archaeal and eukaryotic TBP and TF(II)B differ significantly. Based on recent biophysical data, we speculate how the mechanisms co-evolved with transcription regulation and TBP multiplicity.

摘要

转录因子TBP和TF(II)B与RNA聚合酶在启动子DNA处组装,形成起始复合物。尽管具有高度保守性,但古细菌和真核生物的TBP和TF(II)B的分子结合机制存在显著差异。基于最近的生物物理数据,我们推测了这些机制是如何与转录调控和TBP多样性共同进化的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a38/5501381/1e7d7cd7582f/ktrn-08-03-1289879-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a38/5501381/22509faa85d3/ktrn-08-03-1289879-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a38/5501381/1e7d7cd7582f/ktrn-08-03-1289879-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a38/5501381/22509faa85d3/ktrn-08-03-1289879-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a38/5501381/1e7d7cd7582f/ktrn-08-03-1289879-g002.jpg

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本文引用的文献

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2
Rapid dynamics of general transcription factor TFIIB binding during preinitiation complex assembly revealed by single-molecule analysis.单分子分析揭示起始前复合物组装过程中通用转录因子TFIIB结合的快速动力学。
Genes Dev. 2016 Sep 15;30(18):2106-2118. doi: 10.1101/gad.285395.116.
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Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.
Nat Struct Mol Biol. 2021 Oct;28(10):779-788. doi: 10.1038/s41594-021-00655-w. Epub 2021 Sep 23.
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Promoter-proximal elongation regulates transcription in archaea.启动子近端延伸调控古菌中的转录。
Nat Commun. 2021 Sep 17;12(1):5524. doi: 10.1038/s41467-021-25669-2.
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Archaeal transcription.古菌转录。
Transcription. 2020 Oct;11(5):199-210. doi: 10.1080/21541264.2020.1838865. Epub 2020 Oct 28.
6
Old cogs, new tricks: the evolution of gene expression in a chromatin context.旧零件,新技巧:染色质背景下基因表达的进化。
Nat Rev Genet. 2019 May;20(5):283-297. doi: 10.1038/s41576-019-0105-7.
启动子结合型TFIID的结构与人预起始复合物组装模型
Nature. 2016 Mar 31;531(7596):604-9. doi: 10.1038/nature17394. Epub 2016 Mar 23.
4
Evolution and diversification of the basal transcription machinery.基础转录机制的进化与多样化
Trends Biochem Sci. 2015 Mar;40(3):127-9. doi: 10.1016/j.tibs.2015.01.005. Epub 2015 Feb 5.
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A tale of chromatin and transcription in 100 structures.在 100 个结构中讲述染色质和转录的故事。
Cell. 2014 Nov 20;159(5):985-994. doi: 10.1016/j.cell.2014.10.047.
6
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