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不同结构的光系统I复合物中带有取代醌受体的电子转移反应的动力学建模。

Kinetic modeling of electron transfer reactions in photosystem I complexes of various structures with substituted quinone acceptors.

作者信息

Milanovsky Georgy E, Petrova Anastasia A, Cherepanov Dmitry A, Semenov Alexey Yu

机构信息

A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia.

A.N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Moscow, Russia.

出版信息

Photosynth Res. 2017 Sep;133(1-3):185-199. doi: 10.1007/s11120-017-0366-y. Epub 2017 Mar 28.

Abstract

The reduction kinetics of the photo-oxidized primary electron donor P in photosystem I (PS I) complexes from cyanobacteria Synechocystis sp. PCC 6803 were analyzed within the kinetic model, which considers electron transfer (ET) reactions between P, secondary quinone acceptor A, iron-sulfur clusters and external electron donor and acceptors - methylviologen (MV), 2,3-dichloro-naphthoquinone (ClNQ) and oxygen. PS I complexes containing various quinones in the A-binding site (phylloquinone PhQ, plastoquinone-9 PQ and ClNQ) as well as F -core complexes, depleted of terminal iron-sulfur F /F clusters, were studied. The acceleration of charge recombination in F -core complexes by PhQ/PQ substitution indicates that backward ET from the iron-sulfur clusters involves quinone in the A-binding site. The kinetic parameters of ET reactions were obtained by global fitting of the P reduction with the kinetic model. The free energy gap ΔG between F and F /F clusters was estimated as -130 meV. The driving force of ET from A to F was determined as -50 and -220 meV for PhQ in the A and B cofactor branches, respectively. For PQ in A-site, this reaction was found to be endergonic (ΔG  = +75 meV). The interaction of PS I with external acceptors was quantitatively described in terms of Michaelis-Menten kinetics. The second-order rate constants of ET from F /F , F and ClNQ in the A-site of PS I to external acceptors were estimated. The side production of superoxide radical in the A-site by oxygen reduction via the Mehler reaction might comprise ≥0.3% of the total electron flow in PS I.

摘要

对来自蓝藻集胞藻PCC 6803的光系统I(PS I)复合物中光氧化的初级电子供体P的还原动力学,在动力学模型内进行了分析,该模型考虑了P、次级醌受体A、铁硫簇与外部电子供体和受体——甲基紫精(MV)、2,3 - 二氯萘醌(ClNQ)和氧之间的电子转移(ET)反应。研究了在A结合位点含有各种醌(叶绿醌PhQ、质体醌 - 9 PQ和ClNQ)的PS I复合物以及缺失末端铁硫F /F 簇的F -核心复合物。通过PhQ/PQ替代对F -核心复合物中电荷复合的加速表明,来自铁硫簇的反向ET涉及A结合位点中的醌。通过用动力学模型对P还原进行全局拟合获得了ET反应的动力学参数。F 和F /F 簇之间的自由能差ΔG估计为 - 130 meV。对于A和B辅因子分支中的PhQ,从A到F 的ET驱动力分别确定为 - 50和 - 220 meV。对于A位点中的PQ,发现该反应是吸能的(ΔG  =  + 75 meV)。根据米氏动力学定量描述了PS I与外部受体的相互作用。估计了PS I的A位点中从F /F 、F 和ClNQ到外部受体的ET二级速率常数。通过梅勒反应经氧还原在A位点中产生超氧自由基的副反应可能占PS I中总电子流的≥0.3%。

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