Handy Gregory, Taheri Marsa, White John A, Borisyuk Alla
Department of Mathematics, University of Utah, Salt Lake City, UT, 84112, USA.
Department of Bioengineering, University of Utah, Salt Lake City, UT, 84112, USA.
J Comput Neurosci. 2017 Jun;42(3):257-273. doi: 10.1007/s10827-017-0640-1. Epub 2017 Mar 28.
We study evoked calcium dynamics in astrocytes, a major cell type in the mammalian brain. Experimental evidence has shown that such dynamics are highly variable between different trials, cells, and cell subcompartments. Here we present a qualitative analysis of a recent mathematical model of astrocyte calcium responses. We show how the major response types are generated in the model as a result of the underlying bifurcation structure. By varying key channel parameters, mimicking blockers used by experimentalists, we manipulate this underlying bifurcation structure and predict how the distributions of responses can change. We find that store-operated calcium channels, plasma membrane bound channels with little activity during calcium transients, have a surprisingly strong effect, underscoring the importance of considering these channels in both experiments and mathematical settings. Variation in the maximum flow in different calcium channels is also shown to determine the range of stable oscillations, as well as set the range of frequencies of the oscillations. Further, by conducting a randomized search through the parameter space and recording the resulting calcium responses, we create a database that can be used by experimentalists to help estimate the underlying channel distribution of their cells.
我们研究了星形胶质细胞(哺乳动物大脑中的一种主要细胞类型)中诱发的钙动力学。实验证据表明,这种动力学在不同试验、细胞和细胞亚区室之间具有高度变异性。在此,我们对最近的星形胶质细胞钙反应数学模型进行了定性分析。我们展示了由于潜在的分岔结构,模型中主要反应类型是如何产生的。通过改变关键通道参数,模拟实验人员使用的阻滞剂,我们操纵这种潜在的分岔结构,并预测反应分布如何变化。我们发现,储存式钙通道,即在钙瞬变期间活性较低的质膜结合通道,具有惊人的强大作用,这凸显了在实验和数学研究中考虑这些通道的重要性。不同钙通道中最大流量的变化也显示出决定了稳定振荡的范围,并设定了振荡频率的范围。此外,通过在参数空间中进行随机搜索并记录由此产生的钙反应,我们创建了一个数据库,实验人员可以使用该数据库来帮助估计其细胞的潜在通道分布。