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从环境监测数据估计脊髓灰质炎感染流行率。

Estimation of polio infection prevalence from environmental surveillance data.

机构信息

Department of Industrial Engineering and Management, Ben-Gurion University of the Negev, P. O. 653, Beer-Sheva 84105, Israel.

Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel Hashomer 52621, Israel.

出版信息

Sci Transl Med. 2017 Mar 29;9(383). doi: 10.1126/scitranslmed.aaf6786.

Abstract

A major obstacle to eradicating polio is that poliovirus from endemic countries can be reintroduced to polio-free countries. Environmental surveillance (ES) can detect poliovirus from sewage or wastewaters samples, even in the absence of patients with paralysis. ES is underused, in part because its sensitivity is unknown. We used two unique data sets collected during a natural experiment provided by the 2013 polio outbreak in Israel: ES data from different locations and records of supplemental immunization with the live vaccine. Data from the intersecting population between the two data sets (covering more than 63,000 people) yielded a dose-dependent relationship between the number of poliovirus shedders and the amount of poliovirus in sewage. Using a mixed-effects linear regression analysis of these data, we developed several quantitative tools, such as (i) ascertainment of the number of infected individuals from ES data for application during future epidemics elsewhere, (ii) evaluation of the sensitivity of ES, and (iii) determination of the confidence level of the termination of poliovirus circulation after an outbreak. These results will be valuable in monitoring future outbreaks with ES, and this approach could be used to certify poliovirus elimination or to validate the need for more containment efforts.

摘要

消除脊髓灰质炎的主要障碍是,来自流行国家的脊髓灰质炎病毒可能会重新引入无脊髓灰质炎国家。环境监测(ES)可以从污水或废水样本中检测到脊髓灰质炎病毒,即使没有瘫痪患者也是如此。ES 的使用不足,部分原因是其敏感性未知。我们使用了在以色列 2013 年脊髓灰质炎暴发期间提供的自然实验的两个独特数据集:来自不同地点的 ES 数据和使用活疫苗进行补充免疫的记录。两个数据集交叉人群的数据(覆盖超过 63000 人)显示出病毒脱落者数量与污水中脊髓灰质炎病毒量之间存在剂量依赖性关系。我们对这些数据进行了混合效应线性回归分析,开发了几种定量工具,例如 (i) 从 ES 数据中确定感染个体的数量,以便在其他地方未来的流行中应用,(ii) 评估 ES 的敏感性,以及 (iii) 确定暴发后脊髓灰质炎病毒传播终止的置信水平。这些结果将有助于通过 ES 监测未来的暴发,并且这种方法可用于证明消除脊髓灰质炎病毒或验证需要更多的遏制努力。

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