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Demonstration of Persistent Infections and Genome Stability by Whole-Genome Sequencing of Repeat-Positive, Same-Serovar Chlamydia trachomatis Collected From the Female Genital Tract.通过对从女性生殖道收集的重复阳性、血清型相同的沙眼衣原体进行全基因组测序来证明持续感染和基因组稳定性。
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2
Clinical Persistence of Chlamydia trachomatis Sexually Transmitted Strains Involves Novel Mutations in the Functional αββα Tetramer of the Tryptophan Synthase Operon.临床持续性沙眼衣原体性传播株涉及色氨酸合成酶操纵子功能 αββα 四聚体的新型突变。
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本文引用的文献

1
Global Estimates of the Prevalence and Incidence of Four Curable Sexually Transmitted Infections in 2012 Based on Systematic Review and Global Reporting.基于系统评价和全球报告的2012年四种可治愈性传播感染的患病率和发病率全球估计
PLoS One. 2015 Dec 8;10(12):e0143304. doi: 10.1371/journal.pone.0143304. eCollection 2015.
2
Chlamydia trachomatis In Vivo to In Vitro Transition Reveals Mechanisms of Phase Variation and Down-Regulation of Virulence Factors.沙眼衣原体从体内到体外的转变揭示了相变和毒力因子下调的机制。
PLoS One. 2015 Jul 24;10(7):e0133420. doi: 10.1371/journal.pone.0133420. eCollection 2015.
3
Chlamydia trachomatis virulence factor CT135 is stable in vivo but highly polymorphic in vitro.沙眼衣原体毒力因子CT135在体内稳定,但在体外高度多态。
Pathog Dis. 2015 Aug;73(6):ftv043. doi: 10.1093/femspd/ftv043. Epub 2015 Jun 24.
4
Investigating the epidemiology of repeat Chlamydia trachomatis detection after treatment by using C. trachomatis OmpA genotyping.利用沙眼衣原体OmpA基因分型研究治疗后沙眼衣原体重复检测的流行病学。
J Clin Microbiol. 2015 Feb;53(2):546-9. doi: 10.1128/JCM.02483-14. Epub 2014 Dec 3.
5
Prevalence of Chlamydia trachomatis genital infection among persons aged 14-39 years--United States, 2007-2012.2007 - 2012年美国14 - 39岁人群沙眼衣原体生殖器感染患病率
MMWR Morb Mortal Wkly Rep. 2014 Sep 26;63(38):834-8.
6
Direct amplification, sequencing and profiling of Chlamydia trachomatis strains in single and mixed infection clinical samples.沙眼衣原体菌株在单一感染和混合感染临床样本中的直接扩增、测序及分析
PLoS One. 2014 Jun 27;9(6):e99290. doi: 10.1371/journal.pone.0099290. eCollection 2014.
7
Morphologic and molecular evaluation of Chlamydia trachomatis growth in human endocervix reveals distinct growth patterns.沙眼衣原体在人宫颈内生长的形态学和分子评估揭示了不同的生长模式。
Front Cell Infect Microbiol. 2014 Jun 10;4:71. doi: 10.3389/fcimb.2014.00071. eCollection 2014.
8
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic:一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
9
Hidden in plain sight: chlamydial gastrointestinal infection and its relevance to persistence in human genital infection.隐匿于无形之中:衣原体胃肠道感染及其与人类生殖道感染持续性的关联。
Infect Immun. 2014 Apr;82(4):1362-71. doi: 10.1128/IAI.01244-13. Epub 2014 Jan 13.
10
Culture-independent sequence analysis of Chlamydia trachomatis in urogenital specimens identifies regions of recombination and in-patient sequence mutations.非培养序列分析泌尿生殖道标本中的沙眼衣原体鉴定重组区和住院病人序列突变。
Microbiology (Reading). 2013 Oct;159(Pt 10):2109-2117. doi: 10.1099/mic.0.070029-0. Epub 2013 Jul 10.

通过对从女性生殖道收集的重复阳性、血清型相同的沙眼衣原体进行全基因组测序来证明持续感染和基因组稳定性。

Demonstration of Persistent Infections and Genome Stability by Whole-Genome Sequencing of Repeat-Positive, Same-Serovar Chlamydia trachomatis Collected From the Female Genital Tract.

作者信息

Suchland Robert J, Dimond Zoe E, Putman Timothy E, Rockey Daniel D

机构信息

Department of Allergy and Infectious Diseases, University of Washington School of Medicine, Seattle.

College of Veterinary Medicine and Molecular and Cellular Biology Program, Oregon State University, Corvallis.

出版信息

J Infect Dis. 2017 Jun 1;215(11):1657-1665. doi: 10.1093/infdis/jix155.

DOI:10.1093/infdis/jix155
PMID:28368459
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6543881/
Abstract

BACKGROUND

The biology of recurrent or long-term infections of humans by Chlamydia trachomatis is poorly understood. Because repeated or persistent infections are correlated with serious complications in humans, understanding these processes may improve clinical management and public health disease control.

METHODS

We conducted whole-genome sequence analysis on C. trachomatis isolates collected from a previously described patient set in which individuals were shown to be infected with a single serovar over a lengthy period.

RESULTS

Data from 5 of 7 patients showed compelling evidence for the ability of these patients to harbor the same strain for 3-5 years. Mutations in these strains were cumulative, very uncommon, and not linked to any single protein or pathway. Serovar J strains isolated from 1 patient 3 years apart did not accumulate a single base change across the genome. In contrast, the sequence results of 2 patients, each infected only with serovar Ia strains, revealed multiple same-serovar infections over 1-5 years.

CONCLUSIONS

These data demonstrate examples of long-term persistence in patients in the face of repeated antibiotic therapy and show that pathogen mutational strategies are not important in persistence of this pathogen in patients.

摘要

背景

沙眼衣原体对人类的反复感染或长期感染的生物学机制尚未得到充分了解。由于反复感染或持续性感染与人类的严重并发症相关,了解这些过程可能会改善临床管理和公共卫生疾病控制。

方法

我们对从先前描述的一组患者中收集的沙眼衣原体分离株进行了全基因组序列分析,在这组患者中,个体在很长一段时间内被证明感染了单一血清型。

结果

7名患者中有5名的数据显示了令人信服的证据,证明这些患者能够在3至5年内携带同一菌株。这些菌株中的突变是累积性的,非常罕见,并且与任何单一蛋白质或途径均无关联。从1名患者相隔3年分离出的血清型J菌株在整个基因组中没有积累一个碱基变化。相比之下,2名仅感染血清型Ia菌株的患者的序列结果显示,在1至5年期间发生了多次相同血清型感染。

结论

这些数据证明了在反复进行抗生素治疗的情况下患者长期携带病原体的实例,并表明病原体的突变策略在该病原体在患者体内的持续存在中并不重要。