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一种多重高信息量体外遗传毒性检测方法的实验室间评估

Interlaboratory evaluation of a multiplexed high information content in vitro genotoxicity assay.

作者信息

Bryce Steven M, Bernacki Derek T, Bemis Jeffrey C, Spellman Richard A, Engel Maria E, Schuler Maik, Lorge Elisabeth, Heikkinen Pekka T, Hemmann Ulrike, Thybaud Véronique, Wilde Sabrina, Queisser Nina, Sutter Andreas, Zeller Andreas, Guérard Melanie, Kirkland David, Dertinger Stephen D

机构信息

Litron Laboratories, Rochester, New York.

Pfizer Worldwide Research and Development, Groton, Connecticut.

出版信息

Environ Mol Mutagen. 2017 Apr;58(3):146-161. doi: 10.1002/em.22083.

DOI:10.1002/em.22083
PMID:28370322
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5436310/
Abstract

We previously described a multiplexed in vitro genotoxicity assay based on flow cytometric analysis of detergent-liberated nuclei that are simultaneously stained with propidium iodide and labeled with fluorescent antibodies against p53, γH2AX, and phospho-histone H3. Inclusion of a known number of microspheres provides absolute nuclei counts. The work described herein was undertaken to evaluate the interlaboratory transferability of this assay, commercially known as MultiFlow DNA Damage Kit-p53, γH2AX, Phospho-Histone H3. For these experiments, seven laboratories studied reference chemicals from a group of 84 representing clastogens, aneugens, and nongenotoxicants. TK6 cells were exposed to chemicals in 96-well plates over a range of concentrations for 24 hr. At 4 and 24 hr, cell aliquots were added to the MultiFlow reagent mix and following a brief incubation period flow cytometric analysis occurred, in most cases directly from a 96-well plate via a robotic walk-away data acquisition system. Multiplexed response data were evaluated using two analysis approaches, one based on global evaluation factors (i.e., cutoff values derived from all interlaboratory data), and a second based on multinomial logistic regression that considers multiple biomarkers simultaneously. Both data analysis strategies were devised to categorize chemicals as predominately exhibiting a clastogenic, aneugenic, or nongenotoxic mode of action (MoA). Based on the aggregate 231 experiments that were performed, assay sensitivity, specificity, and concordance in relation to a priori MoA grouping were ≥ 92%. These results are encouraging as they suggest that two distinct data analysis strategies can rapidly and reliably predict new chemicals' predominant genotoxic MoA based on data from an efficient and transferable multiplexed in vitro assay. Environ. Mol. Mutagen. 58:146-161, 2017. © 2017 Wiley Periodicals, Inc.

摘要

我们之前描述了一种基于流式细胞术分析的多重体外遗传毒性检测方法,该方法用于分析经去污剂处理后释放的细胞核,这些细胞核同时用碘化丙啶染色,并用抗p53、γH2AX和磷酸化组蛋白H3的荧光抗体进行标记。加入已知数量的微球可提供绝对的细胞核计数。本文所述的工作旨在评估这种检测方法(商业上称为MultiFlow DNA损伤试剂盒-p53、γH2AX、磷酸化组蛋白H3)在不同实验室之间的可转移性。在这些实验中,七个实验室研究了来自84种参考化学物质中的一组,这些物质代表了致断裂剂、非整倍体诱导剂和非遗传毒性剂。将TK6细胞在96孔板中暴露于一系列浓度的化学物质中24小时。在4小时和24小时时,将细胞 aliquots 加入到MultiFlow试剂混合物中,经过短暂孵育期后进行流式细胞术分析,在大多数情况下直接通过机器人自动数据采集系统从96孔板中进行分析。使用两种分析方法评估多重反应数据,一种基于全局评估因子(即从所有实验室间数据得出的临界值),另一种基于同时考虑多种生物标志物的多项逻辑回归。两种数据分析策略都旨在将化学物质分类为主要表现出致断裂、非整倍体诱导或非遗传毒性作用模式(MoA)。基于总共进行的231次实验,与先验MoA分组相关的检测灵敏度、特异性和一致性≥92%。这些结果令人鼓舞,因为它们表明两种不同的数据分析策略可以基于高效且可转移的多重体外检测数据快速可靠地预测新化学物质主要的遗传毒性MoA。《环境与分子突变》58:146 - 161, 2017年。©2017威利期刊公司。

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本文引用的文献

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γH2AX and p53 responses in TK6 cells discriminate promutagens and nongenotoxicants in the presence of rat liver S9.在大鼠肝脏S9存在的情况下,TK6细胞中的γH2AX和p53反应可区分前诱变剂和非遗传毒性剂。
Environ Mol Mutagen. 2016 Aug;57(7):546-558. doi: 10.1002/em.22028. Epub 2016 Jul 1.
2
Updated recommended lists of genotoxic and non-genotoxic chemicals for assessment of the performance of new or improved genotoxicity tests.用于评估新的或改进的遗传毒性试验性能的遗传毒性和非遗传毒性化学品更新推荐清单。
Mutat Res Genet Toxicol Environ Mutagen. 2016 Jan 1;795:7-30. doi: 10.1016/j.mrgentox.2015.10.006. Epub 2015 Nov 4.
3
Genotoxic mode of action predictions from a multiplexed flow cytometric assay and a machine learning approach.基于多重流式细胞术检测和机器学习方法的遗传毒性作用模式预测
Environ Mol Mutagen. 2016 Apr;57(3):171-89. doi: 10.1002/em.21996. Epub 2016 Jan 13.
4
Genotoxicity of flubendazole and its metabolites in vitro and the impact of a new formulation on in vivo aneugenicity.氟苯达唑及其代谢产物的体外遗传毒性以及一种新制剂对体内非整倍体形成的影响。
Mutagenesis. 2016 May;31(3):309-21. doi: 10.1093/mutage/gev070. Epub 2015 Oct 6.
5
Development of a toxicogenomics signature for genotoxicity using a dose-optimization and informatics strategy in human cells.利用剂量优化和信息学策略在人类细胞中开发用于遗传毒性的毒理基因组学特征。
Environ Mol Mutagen. 2015 Jul;56(6):505-19. doi: 10.1002/em.21941. Epub 2015 Mar 2.
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Histone markers identify the mode of action for compounds positive in the TK6 micronucleus assay.组蛋白标记物可确定在TK6微核试验中呈阳性的化合物的作用模式。
Mutat Res Genet Toxicol Environ Mutagen. 2015 Jan 1;777:7-16. doi: 10.1016/j.mrgentox.2014.11.002. Epub 2014 Nov 15.
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The γH2AX assay for genotoxic and nongenotoxic agents: comparison of H2AX phosphorylation with cell death response.用于遗传毒性和非遗传毒性剂的γH2AX检测:H2AX磷酸化与细胞死亡反应的比较
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A combination of in vitro comet assay and micronucleus test using human lymphoblastoid TK6 cells.采用人淋巴母细胞 TK6 细胞的体外彗星试验和微核试验的联合检测。
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10
Efficient monitoring of in vivo pig-a gene mutation and chromosomal damage: summary of 7 published studies and results from 11 new reference compounds.体内 pig-a 基因突变和染色体损伤的有效监测:7 项已发表研究的总结和 11 种新参考化合物的结果。
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