• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用离子淌度方法进行生物分子的溶液组装:从氨基酸到淀粉样β蛋白

The Solution Assembly of Biological Molecules Using Ion Mobility Methods: From Amino Acids to Amyloid β-Protein.

作者信息

Bleiholder Christian, Bowers Michael T

机构信息

Department of Chemistry and Biochemistry, Institute of Molecular Biophysics, Florida State University, Tallahassee, Florida 32306; email:

Department of Chemistry and Biochemistry, University of California, Santa Barbara, California 93106.

出版信息

Annu Rev Anal Chem (Palo Alto Calif). 2017 Jun 12;10(1):365-386. doi: 10.1146/annurev-anchem-071114-040304. Epub 2017 Mar 24.

DOI:10.1146/annurev-anchem-071114-040304
PMID:28375705
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6287953/
Abstract

Ion mobility spectrometry-mass spectrometry (IMS-MS) methods are increasingly used to study noncovalent assemblies of peptides and proteins. This review focuses on the noncovalent self-assembly of amino acids and peptides, systems at the heart of the amyloid process that play a central role in a number of devastating diseases. Three different systems are discussed in detail: the 42-residue peptide amyloid-β42 implicated in the etiology of Alzheimer's disease, several amyloid-forming peptides with 6-11 residues, and the assembly of individual amino acids. We also discuss from a more fundamental perspective the processes that determine how quickly proteins and their assemblies denature when the analyte ion has been stripped of its solvent in an IMS-MS measurement and how to soften the measurement so that biologically meaningful data can be recorded.

摘要

离子淌度质谱(IMS-MS)方法越来越多地用于研究肽和蛋白质的非共价组装体。本综述聚焦于氨基酸和肽的非共价自组装,这些体系是淀粉样蛋白过程的核心,在许多毁灭性疾病中起着关键作用。详细讨论了三种不同的体系:与阿尔茨海默病病因相关的42个残基的肽淀粉样β-蛋白42、几种具有6-11个残基的淀粉样形成肽以及单个氨基酸的组装。我们还从更基础的角度讨论了在IMS-MS测量中当分析物离子的溶剂被去除时,决定蛋白质及其组装体变性速度的过程,以及如何使测量变得温和以便能够记录具有生物学意义的数据。

相似文献

1
The Solution Assembly of Biological Molecules Using Ion Mobility Methods: From Amino Acids to Amyloid β-Protein.利用离子淌度方法进行生物分子的溶液组装:从氨基酸到淀粉样β蛋白
Annu Rev Anal Chem (Palo Alto Calif). 2017 Jun 12;10(1):365-386. doi: 10.1146/annurev-anchem-071114-040304. Epub 2017 Mar 24.
2
Electrochemistry of Alzheimer Disease Amyloid Beta Peptides.阿尔茨海默病淀粉样β肽的电化学。
Curr Med Chem. 2018;25(33):4066-4083. doi: 10.2174/0929867325666180214112536.
3
Redox reactions of copper complexes formed with different beta-amyloid peptides and their neuropathological [correction of neuropathalogical] relevance.与不同β-淀粉样肽形成的铜配合物的氧化还原反应及其神经病理学相关性[将“neuropathalogical”更正为“neuropathological”]
Biochemistry. 2007 Aug 14;46(32):9270-82. doi: 10.1021/bi700508n. Epub 2007 Jul 18.
4
Ion mobility spectrometry combined with multivariate statistical analysis: revealing the effects of a drug candidate for Alzheimer's disease on Aβ1-40 peptide early assembly.离子淌度谱联用多变量统计分析:揭示阿尔茨海默病候选药物对 Aβ1-40 肽早期聚集的影响。
Anal Bioanal Chem. 2019 Sep;411(24):6353-6363. doi: 10.1007/s00216-019-02030-7. Epub 2019 Aug 12.
5
Distal amyloid β-protein fragments template amyloid assembly.远端淀粉样β蛋白片段为淀粉样蛋白组装提供模板。
Protein Sci. 2018 Jul;27(7):1181-1190. doi: 10.1002/pro.3375. Epub 2018 Feb 16.
6
Detection of Alzheimer's amyloid beta aggregation by capturing molecular trails of individual assemblies.通过捕捉单个聚集体的分子踪迹来检测阿尔茨海默病的淀粉样β蛋白聚集。
Biochem Biophys Res Commun. 2008 Dec 12;377(2):725-728. doi: 10.1016/j.bbrc.2008.10.072. Epub 2008 Oct 23.
7
Generic hydrophobic residues are sufficient to promote aggregation of the Alzheimer's Abeta42 peptide.一般的疏水残基足以促进阿尔茨海默病β-淀粉样蛋白42肽的聚集。
Proc Natl Acad Sci U S A. 2006 Oct 24;103(43):15824-9. doi: 10.1073/pnas.0605629103. Epub 2006 Oct 12.
8
Contact regions in the dimer of Alzheimer beta-amyloid domain [1-28] studied by mass spectrometry.通过质谱法研究阿尔茨海默病β-淀粉样蛋白结构域[1-28]二聚体中的接触区域。
Eur J Mass Spectrom (Chichester). 2004;10(2):309-16. doi: 10.1255/ejms.642.
9
Drastic effects on fibril formation of amyloid-beta peptides by the addition of amino acid residue units to the termini.通过在末端添加氨基酸残基单元对β-淀粉样肽原纤维形成产生的显著影响。
Protein Pept Lett. 2010 Apr;17(4):458-63. doi: 10.2174/092986610790963618.
10
Characterization of Amyloid Oligomers by Electrospray Ionization-Ion Mobility Spectrometry-Mass Spectrometry (ESI-IMS-MS).通过电喷雾电离-离子淌度光谱-质谱法(ESI-IMS-MS)对淀粉样寡聚体进行表征。
Methods Mol Biol. 2016;1345:115-32. doi: 10.1007/978-1-4939-2978-8_8.

引用本文的文献

1
IR Action Spectroscopy of Mass- and Mobility-Selected α-Synuclein Segments: Structure Identification in Early-Stage Oligomers via the Amide A Region.质量和迁移率选择的α-突触核蛋白片段的红外作用光谱:通过酰胺A区域鉴定早期寡聚体的结构
J Phys Chem A. 2025 Sep 4;129(35):8064-8074. doi: 10.1021/acs.jpca.5c02819. Epub 2025 Aug 21.
2
Insights into conformational ensembles of compositionally identical disordered peptidomimetics.对组成相同的无序拟肽构象集合的见解。
Polym Chem. 2024 Aug 7;15(29):2970-2980. doi: 10.1039/D4PY00341A. Epub 2024 Jul 4.
3
Developments in Trapped Ion Mobility Mass Spectrometry to Probe the Early Stages of Peptide Aggregation.被困离子淌度质谱技术在探测肽聚集早期阶段的进展。
J Am Soc Mass Spectrom. 2023 Feb 1;34(2):193-204. doi: 10.1021/jasms.2c00253. Epub 2023 Jan 12.
4
Gas-Phase Unfolding of Protein Complexes Distinguishes Conformational Isomers.气相状态下蛋白质复合物的展开可区分构象异构体。
J Am Chem Soc. 2022 Dec 7;144(48):22128-22139. doi: 10.1021/jacs.2c09573. Epub 2022 Nov 22.
5
Using mass spectrometry-based methods to understand amyloid formation and inhibition of alpha-synuclein and amyloid beta.利用基于质谱的方法来了解α-突触核蛋白和淀粉样β的淀粉样形成和抑制。
Mass Spectrom Rev. 2024 Jul-Aug;43(4):782-825. doi: 10.1002/mas.21814. Epub 2022 Oct 12.
6
Mechanistic insights into accelerated α-synuclein aggregation mediated by human microbiome-associated functional amyloids.人类微生物组相关功能淀粉样蛋白介导的α-突触核蛋白加速聚集的机制见解。
J Biol Chem. 2022 Jul;298(7):102088. doi: 10.1016/j.jbc.2022.102088. Epub 2022 May 30.
7
Tandem-trapped ion mobility spectrometry/mass spectrometry (TIMS/MS): a promising analytical method for investigating heterogenous samples.串联陷阱离子淌度谱/质谱联用(TIMS/MS):一种用于研究异质样品的很有前途的分析方法。
Analyst. 2022 May 30;147(11):2317-2337. doi: 10.1039/d2an00335j.
8
Reassembling protein complexes after controlled disassembly by top-down mass spectrometry in native mode.通过自上而下的质谱法在天然模式下进行可控拆卸后重新组装蛋白质复合物。
Int J Mass Spectrom. 2021 Jul;465. doi: 10.1016/j.ijms.2021.116591. Epub 2021 Mar 27.
9
Trapped Ion Mobility Spectrometry of Native Macromolecular Assemblies.天然大分子组装体的被困离子淌度谱技术。
Anal Chem. 2021 Feb 9;93(5):2933-2941. doi: 10.1021/acs.analchem.0c04556. Epub 2021 Jan 25.
10
Evidence for Many Unique Solution Structures for Chymotrypsin Inhibitor 2: A Thermodynamic Perspective Derived from vT-ESI-IMS-MS Measurements.胰凝乳蛋白酶抑制剂 2 的多种独特溶液结构的证据:来自 vT-ESI-IMS-MS 测量的热力学观点。
J Am Chem Soc. 2020 Oct 14;142(41):17372-17383. doi: 10.1021/jacs.0c05365. Epub 2020 Sep 29.

本文引用的文献

1
An infrared spectroscopy approach to follow β-sheet formation in peptide amyloid assemblies.一种红外光谱方法,用于跟踪肽类淀粉样纤维组装体中的β-折叠形成。
Nat Chem. 2017 Jan;9(1):39-44. doi: 10.1038/nchem.2615. Epub 2016 Sep 26.
2
Towards the Analysis of High Molecular Weight Proteins and Protein complexes using TIMS-MS.利用淌度离子迁移谱-质谱联用技术分析高分子量蛋白质和蛋白质复合物
Int J Ion Mobil Spectrom. 2016 Sep;19(2):95-104. doi: 10.1007/s12127-016-0201-8. Epub 2016 Jun 7.
3
Retention of Native Protein Structures in the Absence of Solvent: A Coupled Ion Mobility and Spectroscopic Study.在缺乏溶剂的情况下保留天然蛋白质结构:耦合离子淌度和光谱研究。
Angew Chem Int Ed Engl. 2016 Nov 2;55(45):14173-14176. doi: 10.1002/anie.201606029. Epub 2016 Aug 22.
4
Folding of Protein Ions in the Gas Phase after Cation-to-Anion Proton-Transfer Reactions.气相中阳离子到阴离子质子转移反应后蛋白质离子的折叠。
J Am Chem Soc. 2016 Aug 3;138(30):9581-8. doi: 10.1021/jacs.6b04282. Epub 2016 Jul 21.
5
On the structural denaturation of biological analytes in trapped ion mobility spectrometry - mass spectrometry.在离子淌度-质谱分析中生物分析物的结构变性。
Analyst. 2016 Jun 7;141(12):3722-30. doi: 10.1039/c5an02399h.
6
Amyloid β-Protein Assembly and Alzheimer's Disease: Dodecamers of Aβ42, but Not of Aβ40, Seed Fibril Formation.淀粉样β蛋白组装与阿尔茨海默病:Aβ42的十二聚体而非Aβ40的十二聚体引发原纤维形成。
J Am Chem Soc. 2016 Feb 17;138(6):1772-5. doi: 10.1021/jacs.5b11913. Epub 2016 Feb 4.
7
Amyloid β-Protein C-Terminal Fragments: Formation of Cylindrins and β-Barrels.淀粉样β蛋白C末端片段:圆柱状蛋白和β桶的形成。
J Am Chem Soc. 2016 Jan 20;138(2):549-57. doi: 10.1021/jacs.5b09536. Epub 2016 Jan 6.
8
Amino Acid Metaclusters: Implications of Growth Trends on Peptide Self-Assembly and Structure.氨基酸元簇:生长趋势对肽自组装和结构的影响
Anal Chem. 2016 Jan 5;88(1):868-76. doi: 10.1021/acs.analchem.5b03454. Epub 2015 Dec 15.
9
Extension of the generic amyloid hypothesis to nonproteinaceous metabolite assemblies.将通用淀粉样蛋白假说扩展至非蛋白质代谢物聚集体。
Sci Adv. 2015 Aug 14;1(7):e1500137. doi: 10.1126/sciadv.1500137. eCollection 2015 Aug.
10
Phenylalanine Oligomers and Fibrils: The Mechanism of Assembly and the Importance of Tetramers and Counterions.苯丙氨酸寡聚物和原纤维:组装机制以及四聚体和抗衡离子的重要性。
J Am Chem Soc. 2015 Aug 19;137(32):10080-3. doi: 10.1021/jacs.5b05482. Epub 2015 Aug 10.