Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York YO10 5DD, UK.
Department of Chemistry, University of York, Heslington, York YO10 5DD, UK.
Sci Rep. 2017 Apr 6;7:45941. doi: 10.1038/srep45941.
Bacteria use siderophores to mediate the transport of essential Fe(III) into the cell. In Campylobacter jejuni the periplasmic binding protein CeuE, an integral part of the Fe(III) transport system, has adapted to bind tetradentate siderophores using a His and a Tyr side chain to complete the Fe(III) coordination. A series of tetradentate siderophore mimics was synthesized in which the length of the linker between the two iron-binding catecholamide units was increased from four carbon atoms (4-LICAM) to five, six and eight (5-, 6-, 8-LICAM, respectively). Co-crystal structures with CeuE showed that the inter-planar angles between the iron-binding catecholamide units in the 5-, 6- and 8-LICAM structures are very similar (111°, 110° and 110°) and allow for an optimum fit into the binding pocket of CeuE, the inter-planar angle in the structure of 4-LICAM is significantly smaller (97°) due to restrictions imposed by the shorter linker. Accordingly, the protein-binding affinity was found to be slightly higher for 5- compared to 4-LICAM but decreases for 6- and 8-LICAM. The optimum linker length of five matches that present in natural siderophores such as enterobactin and azotochelin. Site-directed mutagenesis was used to investigate the relative importance of the Fe(III)-coordinating residues H227 and Y288.
细菌利用铁载体来介导必需的 Fe(III)进入细胞。在空肠弯曲菌中,周质结合蛋白 CeuE 是 Fe(III)转运系统的一个组成部分,它通过使用一个 His 和一个 Tyr 侧链来适应结合四齿配位的铁载体,以完成 Fe(III)的配位。一系列四齿配位的铁载体类似物被合成,其中两个铁结合儿茶酚酰胺单元之间的连接体长度从四个碳原子(4-LICAM)增加到五个、六个和八个(分别为 5-、6-、8-LICAM)。与 CeuE 的共晶结构表明,5-、6-和 8-LICAM 结构中铁结合儿茶酚酰胺单元之间的平面间角度非常相似(111°、110°和 110°),并允许最佳适配 CeuE 的结合口袋,4-LICAM 结构中的平面间角度明显更小(97°),这是由于较短的连接体所施加的限制。因此,与 4-LICAM 相比,5-的蛋白结合亲和力略高,但 6-和 8-LICAM 的结合亲和力降低。最佳的连接体长度为五个,与天然铁载体如 enterobactin 和 azotochelin 中的长度相匹配。定点突变被用来研究 Fe(III)配位残基 H227 和 Y288 的相对重要性。