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小鼠基因组中一个新型重复序列家族的研究。

Studies of a novel repetitive sequence family in the genome of mice.

作者信息

Decoville M, Malfoy B, Locker D

机构信息

Centre de Sélection et d'Elevage des Animaux, Université d'Orléans, France.

出版信息

Eur J Biochem. 1988 Jul 1;174(4):679-84. doi: 10.1111/j.1432-1033.1988.tb14151.x.

DOI:10.1111/j.1432-1033.1988.tb14151.x
PMID:2839338
Abstract

A new middle repetitive sequence is described in the mouse genome. It has been revealed with a recombinant clone isolated from a Mus musculus BamHI gene library constructed in pBR322 and containing an insertion of 1.73 kb. When digests of genomic DNA were subjected to Southern blot hybridization, using the 1.73-kb insert as probe, we obtained a light smear and discrete bands, indicating a dispersion in the mouse genome of this sequence. This 1.73-kb sequence seems to be a part of a greater repetitive sequence at least 6 kb in length. The sizes of the bands hybridizing with the 1.73-kb insert are similar when compared between different laboratory strains but differ remarkably between the two species M. musculus and Mus caroli. We have shown also a great variation in the copy number of the sequence studied between these two species. When rat DNA is probed with the 1.73-kb insert, no hybridization is observed. Subcloning of the 1.73-kb sequence in three fragments has pointed out that the reiteration was not homogeneous along the 1.73-kb sequence. The 1.73-kb clone was sequenced and compared with other interspersed repetitive sequences, previously described in the rodent genome, and no homology was found.

摘要

在小鼠基因组中发现了一种新的中度重复序列。它是通过从构建于pBR322的小家鼠BamHI基因文库中分离出的一个重组克隆揭示的,该克隆含有一个1.73 kb的插入片段。当用基因组DNA酶切产物进行Southern印迹杂交,以1.73 kb的插入片段为探针时,我们得到了一条淡淡的拖尾和离散条带,表明该序列在小鼠基因组中呈分散分布。这个1.73 kb的序列似乎是一个更长的至少6 kb的重复序列的一部分。与1.73 kb插入片段杂交的条带大小在不同实验室品系之间比较时相似,但在小家鼠和卡罗来鼠这两个物种之间差异显著。我们还表明,这两个物种之间所研究序列的拷贝数有很大差异。用1.73 kb插入片段探测大鼠DNA时,未观察到杂交现象。将1.73 kb序列亚克隆为三个片段表明,重复序列在1.73 kb序列上并非均匀分布。对1.73 kb克隆进行了测序,并与先前在啮齿动物基因组中描述的其他散布重复序列进行了比较,未发现同源性。

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引用本文的文献

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Nucleic Acids Res. 1991 Jun 25;19(12):3255-60. doi: 10.1093/nar/19.12.3255.
2
Genomic organization and nucleotide sequence of a long mosaic repetitive DNA in the mouse genome.
Mamm Genome. 1992;2(3):172-85. doi: 10.1007/BF00302875.