• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人绿色视蛋白的氢/氘交换质谱分析揭示了单稳态视觉G蛋白偶联受体细胞外环2中一个保守的脯氨酸-脯氨酸基序。

Hydrogen/Deuterium Exchange Mass Spectrometry of Human Green Opsin Reveals a Conserved Pro-Pro Motif in Extracellular Loop 2 of Monostable Visual G Protein-Coupled Receptors.

作者信息

Hofmann Lukas, Alexander Nathan S, Sun Wenyu, Zhang Jianye, Orban Tivadar, Palczewski Krzysztof

机构信息

Department of Pharmacology and Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University , 10900 Euclid Avenue, Cleveland, Ohio 44106, United States.

出版信息

Biochemistry. 2017 May 2;56(17):2338-2348. doi: 10.1021/acs.biochem.7b00165. Epub 2017 Apr 21.

DOI:10.1021/acs.biochem.7b00165
PMID:28402104
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5501310/
Abstract

Opsins comprise the protein component of light sensitive G protein-coupled receptors (GPCRs) in the retina of the eye that are responsible for the transduction of light into a biochemical signal. Here, we used hydrogen/deuterium (H/D) exchange coupled with mass spectrometry to map conformational changes in green cone opsin upon light activation. We then compared these findings with those reported for rhodopsin. The extent of H/D exchange in green cone opsin was greater than in rhodopsin in the dark and bleached states, suggesting a higher structural heterogeneity for green cone opsin. Further analysis revealed that green cone opsin exists as a dimer in both dark (inactive) and bleached (active) states, and that the predicted glycosylation sites at N and N are indeed glycosylated. Comparison of deuterium uptake between inactive and active states of green cone opsin also disclosed a reduced solvent accessibility of the extracellular N-terminal region and an increased accessibility of the chromophore binding site. Increased H/D exchange at the extracellular side of transmembrane helix four (TM4) combined with an analysis of sequence alignments revealed a conserved Pro-Pro motif in extracellular loop 2 (EL2) of monostable visual GPCRs. These data present new insights into the locus of chromophore release at the extracellular side of TM4 and TM5 and provide a foundation for future functional evaluation.

摘要

视蛋白构成了眼睛视网膜中对光敏感的G蛋白偶联受体(GPCRs)的蛋白质成分,负责将光转化为生化信号。在此,我们使用氢/氘(H/D)交换结合质谱法来绘制绿光视锥蛋白在光激活时的构象变化。然后,我们将这些发现与视紫红质的相关报道进行了比较。在黑暗和漂白状态下,绿光视锥蛋白的H/D交换程度均大于视紫红质,这表明绿光视锥蛋白具有更高的结构异质性。进一步分析表明,绿光视锥蛋白在黑暗(非活性)和漂白(活性)状态下均以二聚体形式存在,并且预测的N和N处的糖基化位点确实发生了糖基化。比较绿光视锥蛋白非活性和活性状态之间的氘摄取情况还发现,细胞外N端区域的溶剂可及性降低,而发色团结合位点的可及性增加。跨膜螺旋4(TM4)细胞外侧的H/D交换增加,结合序列比对分析,揭示了单稳态视觉GPCRs细胞外环2(EL2)中一个保守的脯氨酸-脯氨酸基序。这些数据为TM4和TM5细胞外侧发色团释放的位点提供了新的见解,并为未来的功能评估奠定了基础。

相似文献

1
Hydrogen/Deuterium Exchange Mass Spectrometry of Human Green Opsin Reveals a Conserved Pro-Pro Motif in Extracellular Loop 2 of Monostable Visual G Protein-Coupled Receptors.人绿色视蛋白的氢/氘交换质谱分析揭示了单稳态视觉G蛋白偶联受体细胞外环2中一个保守的脯氨酸-脯氨酸基序。
Biochemistry. 2017 May 2;56(17):2338-2348. doi: 10.1021/acs.biochem.7b00165. Epub 2017 Apr 21.
2
A naturally occurring mutation of the opsin gene (T4R) in dogs affects glycosylation and stability of the G protein-coupled receptor.犬视蛋白基因(T4R)的一种自然发生的突变会影响G蛋白偶联受体的糖基化和稳定性。
J Biol Chem. 2004 Dec 17;279(51):53828-39. doi: 10.1074/jbc.M408472200. Epub 2004 Sep 30.
3
A G Protein-Coupled Receptor Dimerization Interface in Human Cone Opsins.人类视锥视蛋白中的G蛋白偶联受体二聚化界面
Biochemistry. 2017 Jan 10;56(1):61-72. doi: 10.1021/acs.biochem.6b00877. Epub 2016 Nov 29.
4
Crystal structure of the ligand-free G-protein-coupled receptor opsin.无配体G蛋白偶联受体视蛋白的晶体结构。
Nature. 2008 Jul 10;454(7201):183-7. doi: 10.1038/nature07063. Epub 2008 Jun 18.
5
Human Blue Cone Opsin Regeneration Involves Secondary Retinal Binding with Analog Specificity.人类蓝色视锥蛋白再生涉及与模拟特异性的次级视网膜结合。
Biophys J. 2018 Mar 27;114(6):1285-1294. doi: 10.1016/j.bpj.2018.01.032.
6
Agonist-induced conformational changes in bovine rhodopsin: insight into activation of G-protein-coupled receptors.激动剂诱导的牛视紫红质构象变化:深入了解G蛋白偶联受体的激活
J Mol Biol. 2008 Oct 3;382(2):539-55. doi: 10.1016/j.jmb.2008.06.084. Epub 2008 Jul 7.
7
[Molecular dynamics simulation of dark-adapted rhodopsin and free opsin].[暗适应视紫红质和游离视蛋白的分子动力学模拟]
Ross Fiziol Zh Im I M Sechenova. 2005 Dec;91(12):1377-97.
8
The opsins.视蛋白
Genome Biol. 2005;6(3):213. doi: 10.1186/gb-2005-6-3-213. Epub 2005 Mar 1.
9
In vitro assays of rod and cone opsin activity: retinoid analogs as agonists and inverse agonists.视杆和视锥视蛋白活性的体外测定:类视黄醇类似物作为激动剂和反向激动剂。
Methods Mol Biol. 2010;652:85-94. doi: 10.1007/978-1-60327-325-1_4.
10
Specificity of the chromophore-binding site in human cone opsins.人眼视锥细胞视色素结合部位的特异性。
J Biol Chem. 2019 Apr 12;294(15):6082-6093. doi: 10.1074/jbc.RA119.007587. Epub 2019 Feb 15.

引用本文的文献

1
Disease mechanisms of X-linked cone dystrophy caused by missense mutations in the red and green cone opsins.X 连锁型视锥细胞营养不良的疾病机制是由于红色和绿色视锥蛋白的错义突变引起的。
FASEB J. 2021 Oct;35(10):e21927. doi: 10.1096/fj.202101066R.
2
Advances in Hydrogen/Deuterium Exchange Mass Spectrometry and the Pursuit of Challenging Biological Systems.氢/氘交换质谱技术的进展及对挑战性生物系统的探索。
Chem Rev. 2022 Apr 27;122(8):7562-7623. doi: 10.1021/acs.chemrev.1c00279. Epub 2021 Sep 7.
3
PAR4 activation involves extracellular loop 3 and transmembrane residue Thr153.

本文引用的文献

1
The G protein-coupled receptor N-terminus and receptor signalling: N-tering a new era.G蛋白偶联受体的N端与受体信号传导:开启新时代。
Cell Signal. 2017 May;33:1-9. doi: 10.1016/j.cellsig.2017.02.004. Epub 2017 Feb 8.
2
Crystal Structure of an LSD-Bound Human Serotonin Receptor.结合麦角酰二乙胺的人血清素受体的晶体结构
Cell. 2017 Jan 26;168(3):377-389.e12. doi: 10.1016/j.cell.2016.12.033.
3
A G Protein-Coupled Receptor Dimerization Interface in Human Cone Opsins.人类视锥视蛋白中的G蛋白偶联受体二聚化界面
PAR4 的激活涉及细胞外环 3 和跨膜残基 Thr153。
Blood. 2020 Nov 5;136(19):2217-2228. doi: 10.1182/blood.2019004634.
4
Human red and green cone opsins are -glycosylated at an N-terminal Ser/Thr-rich domain conserved in vertebrates.人类的红、绿视锥蛋白在脊椎动物保守的 N 端富含丝氨酸/苏氨酸的结构域发生糖基化。
J Biol Chem. 2019 May 17;294(20):8123-8133. doi: 10.1074/jbc.RA118.006835. Epub 2019 Apr 4.
Biochemistry. 2017 Jan 10;56(1):61-72. doi: 10.1021/acs.biochem.6b00877. Epub 2016 Nov 29.
4
Retinoids and Retinal Diseases.类视黄醇与视网膜疾病。
Annu Rev Vis Sci. 2016 Oct;2:197-234. doi: 10.1146/annurev-vision-111815-114407. Epub 2016 Jul 18.
5
High-resolution crystal structure of the human CB1 cannabinoid receptor.人类CB1大麻素受体的高分辨率晶体结构。
Nature. 2016 Dec 22;540(7634):602-606. doi: 10.1038/nature20613. Epub 2016 Nov 16.
6
The diverse and expanding role of mass spectrometry in structural and molecular biology.质谱分析法在结构生物学和分子生物学中多样且不断扩展的作用。
EMBO J. 2016 Dec 15;35(24):2634-2657. doi: 10.15252/embj.201694818. Epub 2016 Oct 26.
7
Dynamic peptides of human TPP1 fulfill diverse functions in telomere maintenance.人端粒保护蛋白1的动态肽段在端粒维持中发挥多种功能。
Nucleic Acids Res. 2016 Dec 1;44(21):10467-10479. doi: 10.1093/nar/gkw846. Epub 2016 Sep 20.
8
Structural and thermodynamic basis of proline-induced transmembrane complex stabilization.脯氨酸诱导跨膜复合物稳定的结构和热力学基础。
Sci Rep. 2016 Jul 20;6:29809. doi: 10.1038/srep29809.
9
Ligand Binding Induces Conformational Changes in Human Cellular Retinol-binding Protein 1 (CRBP1) Revealed by Atomic Resolution Crystal Structures.原子分辨率晶体结构揭示配体结合诱导人细胞视黄醇结合蛋白1(CRBP1)的构象变化
J Biol Chem. 2016 Apr 15;291(16):8528-40. doi: 10.1074/jbc.M116.714535. Epub 2016 Feb 21.
10
An effective thiol-reactive probe for differential scanning fluorimetry with a standard real-time polymerase chain reaction device.一种可与标准实时聚合酶链反应装置联用的用于差示扫描荧光法的有效硫醇反应性探针。
Anal Biochem. 2016 Apr 15;499:63-65. doi: 10.1016/j.ab.2016.01.016. Epub 2016 Feb 4.