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巴西帕拉州孕妇中HIV-1的低遗传变异性和抗逆转录病毒药物耐药性

Lower genetic variability of HIV-1 and antiretroviral drug resistance in pregnant women from the state of Pará, Brazil.

作者信息

Machado Luiz Fernando Almeida, Costa Iran Barros, Folha Maria Nazaré, da Luz Anderson Levy Bessa, Vallinoto Antonio Carlos Rosário, Ishak Ricardo, Ishak Marluisa Oliveira Guimarães

机构信息

Virology Laboratory, Institute of Biological Sciences, Federal University of Pará, Augusto Correa 1, Guama, Belem, Para, CEP 66075-110, Brazil.

Reference Unit Specialized in Maternal-Child and Adolescent Care, Alcindo Cacela 1421, Sao Bras, CEP 66040-020, Belem, Pará, Brazil.

出版信息

BMC Infect Dis. 2017 Apr 12;17(1):270. doi: 10.1186/s12879-017-2392-y.

Abstract

BACKGROUND

The present study aimed to describe the genetic diversity of HIV-1, as well as the resistance profile of the viruses identified in HIV-1 infected pregnant women under antiretroviral therapy in the state of Pará, Northern Brazil.

METHODS

Blood samples were collected from 45 HIV-1 infected pregnant to determine the virus subtypes according to the HIV-1 protease (PR) gene and part of the HIV-1 reverse transcriptase (RT) gene by sequencing the nucleotides of these regions. Drug resistance mutations and susceptibility to antiretroviral drugs were analyzed by the Stanford HIV Drug Resistance Database.

RESULTS

Out of 45 samples, only 34 could be amplified for PR and 30 for RT. Regarding the PR gene, subtypes B (97.1%) and C (2.9%) were identified; for the RT gene, subtypes B (90.0%), F (6.7%), and C (3.3%) were detected. Resistance to protease inhibitors (PI) was identified in 5.8% of the pregnant, and mutations conferring resistance to nucleoside reverse transcriptase inhibitors were found in 3.3%, while mutations conferring resistance to non-nucleoside reverse transcriptase inhibitors were found in 3.3%.

CONCLUSIONS

These results showed a low frequency of strains resistant to antiretroviral drugs, the prevalence of subtypes B and F, and the persistent low transmission of subtype C in pregnant of the state of Pará, Brazil.

摘要

背景

本研究旨在描述HIV-1的基因多样性,以及在巴西北部帕拉州接受抗逆转录病毒治疗的HIV-1感染孕妇中鉴定出的病毒耐药情况。

方法

采集45名HIV-1感染孕妇的血样,通过对HIV-1蛋白酶(PR)基因和HIV-1逆转录酶(RT)基因部分区域的核苷酸进行测序来确定病毒亚型。利用斯坦福HIV耐药数据库分析耐药突变和对抗逆转录病毒药物的敏感性。

结果

45份样本中,仅34份PR基因可扩增,30份RT基因可扩增。关于PR基因,鉴定出B亚型(97.1%)和C亚型(2.9%);对于RT基因,检测到B亚型(90.0%)、F亚型(6.7%)和C亚型(3.3%)。5.8%的孕妇中鉴定出对蛋白酶抑制剂(PI)耐药,3.3%的孕妇中发现对核苷类逆转录酶抑制剂耐药的突变,3.3%的孕妇中发现对非核苷类逆转录酶抑制剂耐药的突变。

结论

这些结果表明,在巴西帕拉州的孕妇中,对抗逆转录病毒药物耐药的毒株频率较低,B亚型和F亚型流行,C亚型的传播持续处于低水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d612/5389155/269a2f63f098/12879_2017_2392_Fig1_HTML.jpg

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