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丹麦荷斯坦奶牛乳腺炎易感性和恢复能力的双变量阈值模型的遗传评估。

Bivariate threshold models for genetic evaluation of susceptibility to and ability to recover from mastitis in Danish Holstein cows.

机构信息

Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Box 7023, SE-750 07 Uppsala, Sweden; Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, Blichers Allé 20, PO Box 50, DK-8830 Tjele, Denmark.

Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, Blichers Allé 20, PO Box 50, DK-8830 Tjele, Denmark.

出版信息

J Dairy Sci. 2017 Jun;100(6):4706-4720. doi: 10.3168/jds.2016-11894. Epub 2017 Apr 21.

Abstract

Mastitis in dairy cows is an unavoidable problem and genetic variation in recovery from mastitis, in addition to susceptibility, is therefore of interest. Genetic parameters for susceptibility to and recovery from mastitis were estimated for Danish Holstein-Friesian cows using data from automatic milking systems equipped with online somatic cell count measuring units. The somatic cell count measurements were converted to elevated mastitis risk, a continuous variable [on a (0-1) scale] indicating the risk of mastitis. Risk values >0.6 were assumed to indicate that a cow had mastitis. For each cow and lactation, the sequence of health states (mastitic or healthy) was converted to a weekly transition: 0 if the cow stayed within the same state and 1 if the cow changed state. The result was 2 series of transitions: one for healthy to diseased (HD, to model mastitis susceptibility) and the other for diseased to healthy (DH, to model recovery ability). The 2 series of transitions were analyzed with bivariate threshold models, including several systematic effects and a function of time. The model included effects of herd, parity, herd-test-week, permanent environment (to account for the repetitive nature of transition records from a cow) plus two time-varying effects (lactation stage and time within episode). In early lactation, there was an increased risk of getting mastitis but the risk remained stable afterwards. Mean recovery rate was 45% per lactation. Heritabilities were 0.07 [posterior mean of standard deviations (PSD) = 0.03] for HD and 0.08 (PSD = 0.03) for DH. The genetic correlation between HD and DH has a posterior mean of -0.83 (PSD = 0.13). Although susceptibility and recovery from mastitis are strongly negatively correlated, recovery can be considered as a new trait for selection.

摘要

奶牛乳腺炎是一种不可避免的问题,除了易感性之外,乳腺炎的恢复能力的遗传变异也因此受到关注。使用配备在线体细胞计数测量单元的自动挤奶系统的数据,估计了丹麦荷斯坦奶牛对乳腺炎的易感性和恢复能力的遗传参数。体细胞计数测量值被转换为乳腺炎风险升高,这是一个连续变量[在(0-1)范围内],表示乳腺炎的风险。假设风险值>0.6 表示奶牛患有乳腺炎。对于每头奶牛和泌乳期,健康状态(乳腺炎或健康)的序列被转换为每周的状态转换:如果奶牛保持在相同的状态,则为 0,如果奶牛改变状态,则为 1。结果是 2 个状态转换系列:一个用于健康到患病(HD,用于模拟乳腺炎易感性),另一个用于患病到健康(DH,用于模拟恢复能力)。这 2 个系列的转换用双变量门限模型进行分析,包括几个系统效应和时间函数。该模型包括畜群、胎次、畜群测试周、永久环境(用于解释从奶牛获得的转换记录的重复性)加上两个时变效应(泌乳阶段和发作内时间)的影响。在泌乳早期,患乳腺炎的风险增加,但之后风险保持稳定。每次泌乳的平均恢复率为 45%。HD 的遗传力为 0.07(PSD=0.03),DH 的遗传力为 0.08(PSD=0.03)。HD 和 DH 之间的遗传相关性的后验均值为-0.83(PSD=0.13)。尽管乳腺炎的易感性和恢复能力呈强烈负相关,但恢复能力可以被认为是一个新的选择特征。

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