Liu Kun C, Jinneman Karen C, Neal-McKinney Jason, Wu Wen-Hsin, Rice Daniel H
Pacific Regional Laboratory Northwest, Applied Technology Center , US Food and Drug Administration, Bothell, Washington.
Foodborne Pathog Dis. 2017 Jul;14(7):371-378. doi: 10.1089/fpd.2016.2245. Epub 2017 Apr 25.
Consumption of Campylobacter contaminated food or water is a leading cause of human acute gastroenteritis. Campylobacter jejuni, Campylobacter coli, and Campylobacter lari account for over 95% of total Campylobacter infections. A multiplex quantitative polymerase chain reaction (qPCR) for simultaneous identification of C. jejuni, C. coli, and C. lari was developed for use with the SmartCycler II system.
We evaluated and combined previously described primers and probes for Campylobacter detection, designed a new internal amplification control, and optimized the multiplex qPCR for the detection of C. jejuni, C. coli, and C. lari.
This method was 100% specific when tested against a panel of 32 target Campylobacter strains and 31 non-Campylobacter reference strains. Furthermore, there was no cross-reactivity with seven strains from four nontarget Campylobacter species. The amplification efficiency of each target in this multiplex qPCR was over 90%, and each coefficient of linearity was greater than 0.99. With artificially mixed genomic DNA, this method detected as few as two, three, and two genome copies of C. jejuni, C. coli, and C. lari, respectively. This method was also able to detect these three Campylobacter species in artificially contaminated milk with a sensitivity of five spiked cells of each target per reaction.
The three Campylobacter targets were simultaneously identified using artificially mixed genomic DNA and spiked raw milk. This SmartCycler-based multiplex qPCR is a rapid, specific, and sensitive method to identify C. jejuni, C. coli, and C. lari.
食用被弯曲杆菌污染的食物或水是人类急性肠胃炎的主要病因。空肠弯曲杆菌、结肠弯曲杆菌和拉氏弯曲杆菌占弯曲杆菌总感染病例的95%以上。已开发出一种用于同时鉴定空肠弯曲杆菌、结肠弯曲杆菌和拉氏弯曲杆菌的多重定量聚合酶链反应(qPCR),用于SmartCycler II系统。
我们评估并组合了先前描述的用于弯曲杆菌检测的引物和探针,设计了一种新的内部扩增对照,并优化了用于检测空肠弯曲杆菌、结肠弯曲杆菌和拉氏弯曲杆菌的多重qPCR。
该方法在针对32株目标弯曲杆菌菌株和31株非弯曲杆菌参考菌株进行测试时具有100%的特异性。此外,与来自四种非目标弯曲杆菌物种的七株菌株没有交叉反应。此多重qPCR中每个目标的扩增效率超过90%,每个线性系数大于0.99。对于人工混合的基因组DNA,该方法分别能检测到低至两个、三个和两个空肠弯曲杆菌、结肠弯曲杆菌和拉氏弯曲杆菌的基因组拷贝。该方法还能够在人工污染的牛奶中检测到这三种弯曲杆菌物种,每个反应对每个目标的加标细胞的灵敏度为五个。
使用人工混合的基因组DNA和加标生牛奶同时鉴定了三种弯曲杆菌目标。这种基于SmartCycler的多重qPCR是一种快速、特异且灵敏的鉴定空肠弯曲杆菌、结肠弯曲杆菌和拉氏弯曲杆菌的方法。