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轴突退化基因SARM1在进化上与其他含TIR结构域的蛋白质不同。

The axon degeneration gene SARM1 is evolutionarily distinct from other TIR domain-containing proteins.

作者信息

Malapati Harsha, Millen Spencer M, J Buchser William

机构信息

Department of Biology, College of William & Mary, 540 Landrum Dr., Williamsburg, VA, USA.

Neuroscience Program, College of William & Mary, Williamsburg, VA, USA.

出版信息

Mol Genet Genomics. 2017 Aug;292(4):909-922. doi: 10.1007/s00438-017-1320-6. Epub 2017 Apr 26.

DOI:10.1007/s00438-017-1320-6
PMID:28447196
Abstract

Many forms of neurodegenerative disease are characterized by Wallerian degeneration, an active program of axonal destruction. Recently, the important player which enacts Wallerian degeneration was discovered, the multidomain protein SARM1. Since the SARM1 protein has classically been thought of as an innate immune molecule, its role in Wallerian degeneration has raised questions on the evolutionary forces acting on it. Here, we synthesize a picture of SARM1's evolution through various organisms by examining the molecular and genetic changes of SARM1 and the genes around it. Using proteins that possess domains homologous to SARM1, we established distances and Ka/Ks values through 5671 pairwise species-species comparisons. We demonstrate that SARM1 diverged across species in a pattern similar to other SAM domain-containing proteins. This is surprising, because it was expected that SARM1 would behave more like its TIR domain relatives. Going along with this divorce from TIR, we also noted that SARM1's TIR is under stronger purifying selection than the rest of the TIR domain-containing proteins (remaining highly conserved). In addition, SARM1's synteny analysis reveals that the surrounding gene cluster is highly conserved, functioning as a potential nexus of gene functionality across species. Taken together, SARM1 demonstrates a unique evolutionary pattern, separate from the TIR domain protein family.

摘要

许多形式的神经退行性疾病都以沃勒变性为特征,这是一种轴突破坏的活跃过程。最近,人们发现了引发沃勒变性的重要因子——多结构域蛋白SARM1。由于SARM1蛋白传统上被认为是一种先天性免疫分子,它在沃勒变性中的作用引发了关于作用于它的进化力量的问题。在这里,我们通过研究SARM1及其周围基因的分子和遗传变化,综合描绘了SARM1在各种生物体中的进化情况。利用与SARM1具有同源结构域的蛋白质,我们通过5671对物种间的比较确定了距离和Ka/Ks值。我们证明,SARM1在物种间的分化模式与其他含SAM结构域的蛋白质相似。这很令人惊讶,因为预计SARM1的行为会更像其含TIR结构域的亲属。伴随着与TIR的这种分离,我们还注意到,与其他含TIR结构域的蛋白质相比,SARM1的TIR受到更强的纯化选择(保持高度保守)。此外,SARM1的共线性分析表明,其周围的基因簇高度保守,作为跨物种基因功能的潜在连接点发挥作用。综上所述,SARM1展示了一种独特的进化模式,与TIR结构域蛋白家族不同。

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1
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Neuron. 2017 Mar 22;93(6):1334-1343.e5. doi: 10.1016/j.neuron.2017.02.022.
2
The TIR Homologue Lies near Resistance Genes in Staphylococcus aureus, Coupling Modulation of Virulence and Antimicrobial Susceptibility.TIR 同源物位于金黄色葡萄球菌的抗性基因附近,与毒力调节和抗菌敏感性相关联。
PLoS Pathog. 2017 Jan 6;13(1):e1006092. doi: 10.1371/journal.ppat.1006092. eCollection 2017 Jan.
3
Prevention of vincristine-induced peripheral neuropathy by genetic deletion of SARM1 in mice.
基于域的数据库可揭示最小特征化病毒基因组的结构。
Sci Data. 2020 Jun 25;7(1):202. doi: 10.1038/s41597-020-0536-1.
4
Passenger Mutations Confound Phenotypes of SARM1-Deficient Mice.乘客突变使 SARM1 缺陷型小鼠的表型复杂化。
Cell Rep. 2020 Apr 7;31(1):107498. doi: 10.1016/j.celrep.2020.03.062.
5
Targeting the programmed axon degeneration pathway as a potential therapeutic for Charcot-Marie-Tooth disease.靶向程序化轴突变性途径作为治疗腓骨肌萎缩症的潜在疗法。
Brain Res. 2020 Jan 15;1727:146539. doi: 10.1016/j.brainres.2019.146539. Epub 2019 Nov 2.
6
Axonal Degeneration during Aging and Its Functional Role in Neurodegenerative Disorders.衰老过程中的轴突退化及其在神经退行性疾病中的功能作用。
Front Neurosci. 2017 Sep 4;11:451. doi: 10.3389/fnins.2017.00451. eCollection 2017.
通过基因敲除小鼠中的SARM1预防长春新碱诱导的周围神经病变。
Brain. 2016 Dec;139(Pt 12):3092-3108. doi: 10.1093/brain/aww251. Epub 2016 Oct 25.
4
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5
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J Comp Physiol A Neuroethol Sens Neural Behav Physiol. 2016 Nov;202(11):813-822. doi: 10.1007/s00359-016-1123-y. Epub 2016 Sep 10.
6
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Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
7
Attenuated traumatic axonal injury and improved functional outcome after traumatic brain injury in mice lacking Sarm1.缺乏Sarm1的小鼠创伤性脑损伤后创伤性轴突损伤减轻及功能预后改善
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8
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Neuron. 2016 Feb 3;89(3):449-60. doi: 10.1016/j.neuron.2015.12.023.
9
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