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东海动性球菌JH1(一种果胶降解细菌)的全基因组序列

Complete genome sequence of Planococcus donghaensis JH1, a pectin-degrading bacterium.

作者信息

See-Too Wah-Seng, Chua Kah-Ooi, Lim Yan-Lue, Chen Jian-Woon, Convey Peter, Mohd Mohidin Taznim Begam, Yin Wai-Fong, Chan Kok-Gan

机构信息

Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia; National Antarctic Research Centre (NARC), Institute of Postgraduate Studies, University of Malaya, 50603 Kuala Lumpur, Malaysia.

Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.

出版信息

J Biotechnol. 2017 Jun 20;252:11-14. doi: 10.1016/j.jbiotec.2017.05.005. Epub 2017 May 5.

Abstract

The type strain Planococcus donghaensis JH1 is a psychrotolerant and halotolerant bacterium with starch-degrading ability. Here, we determine the carbon utilization profile of P. donghaensis JH1 and report the first complete genome of the strain. This study revealed the strain's ability to utilize pectin and d-galacturonic acid, and identified genes responsible for degradation of the polysaccharides. The genomic information provided may serve as a fundamental resource for full exploration of the biotechnological potential of P. donghaensis JH1.

摘要

模式菌株东海动性球菌JH1是一种具有淀粉降解能力的耐冷和耐盐细菌。在此,我们确定了东海动性球菌JH1的碳利用谱,并报道了该菌株的首个完整基因组。本研究揭示了该菌株利用果胶和D-半乳糖醛酸的能力,并鉴定了负责多糖降解的基因。所提供的基因组信息可能成为全面探索东海动性球菌JH1生物技术潜力的基础资源。

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