Kumar Santosh, Downie Ruiz Velasco Angela, Michlewski Gracjan
Wellcome Trust Centre for Cell Biology, University of Edinburgh, Michael Swann Building, Edinburgh, EH9 3BF, UK.
Wellcome Trust Centre for Cell Biology, University of Edinburgh, Michael Swann Building, Edinburgh, EH9 3BF, UK.
J Mol Biol. 2017 Jun 2;429(11):1638-1649. doi: 10.1016/j.jmb.2017.05.001. Epub 2017 May 5.
MicroRNAs (miRs) play a vital role in governing cell function, with their levels tightly controlled at transcriptional and post-transcriptional levels. Different sets of RNA-binding proteins interact with primary miRs (pri-miRs) and precursor-miR transcripts (pre-miRs), controlling their biogenesis post-transcriptionally. The Hu antigen R (HuR)-mediated binding of Musashi homolog2 (MSI2) to the conserved terminal loop of pri-miR-7 regulates the levels of brain-enriched miR-7 formation in a tissue-specific manner. Here, we show that oleic acid (OA) inhibits the binding of proteins containing RNA recognition motifs (RRM) to the conserved terminal loop of pri-miR-7. Using electrophoretic mobility shift assays in HeLa cell extracts, we show that OA treatment disrupts pre-miR/protein complexes. Furthermore, OA rescues in vitro processing of pri-miR-7, which is otherwise blocked by HuR and MSI2 proteins. On the contrary, pri-miR-16 shows reduced processing in the presence of OA. This indicates that OA may inhibit the binding of other RRM-containing protein/s necessary for miR-16 processing. Finally, we demonstrate that OA induces mature miR-7 production in HeLa cells. Together, our results demonstrate that OA can regulate the processing of pri-miRs by remodeling their protein complexes. This provides a new tool to study RNA processing and a potential lead for small molecules that target the miR-7 biogenesis pathway.
微小RNA(miRs)在调控细胞功能中发挥着至关重要的作用,其水平在转录和转录后水平受到严格控制。不同的RNA结合蛋白与初级miR(pri-miR)和前体miR转录本(pre-miR)相互作用,在转录后控制它们的生物合成。Hu抗原R(HuR)介导的武藏同源物2(MSI2)与pri-miR-7保守末端环的结合以组织特异性方式调节脑富集miR-7的形成水平。在这里,我们表明油酸(OA)抑制含有RNA识别基序(RRM)的蛋白质与pri-miR-7保守末端环的结合。利用HeLa细胞提取物中的电泳迁移率变动分析,我们表明OA处理会破坏pre-miR/蛋白质复合物。此外,OA挽救了pri-miR-7的体外加工过程,否则该过程会被HuR和MSI2蛋白阻断。相反,在OA存在下,pri-miR-16的加工减少。这表明OA可能抑制miR-16加工所需的其他含RRM蛋白的结合。最后,我们证明OA可诱导HeLa细胞中成熟miR-7的产生。总之,我们的结果表明OA可以通过重塑其蛋白质复合物来调节pri-miR的加工。这为研究RNA加工提供了一种新工具,并为靶向miR-7生物合成途径的小分子提供了潜在线索。