Jag Vanessa, Poehlein Anja, Bengelsdorf Frank R, Daniel Rolf, Dürre Peter
Institut für Mikrobiologie und Biotechnologie, Universität Ulm, Albert-Einstein-Allee 11, D-89081 Ulm, Germany.
Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University Göttingen, Grisebachstr. 8, D-37077 Göttingen, Germany.
Stand Genomic Sci. 2017 May 4;12:30. doi: 10.1186/s40793-017-0244-4. eCollection 2017.
A nonmotile, Gram-positive bacterium that shows an elongated and branching cell shape was isolated from soil samples from the botanical garden of Ulm University, Ulm, Germany. Here, the isolation procedure, identification, genome sequencing and metabolic features of the strain are described. Phylogenetic analysis allowed to identify the isolated strain as The genus belongs to the family within the order . The length of cells of ranges from 1 μm to 15 μm, depending on the growth phase. In the exponential growth phase, cells show an elongated and branching shape, whereas cells break up to round or coccoid elements in the stationary growth phase. The 4,535,074 bp long genome consists of 85 contigs with 3918 protein-coding genes and 57 RNA genes. The isolated strain was shown to degrade numerous complex carbon sources such as cellulose, chitin, and starch, which can be found ubiquitously in nature. Moreover, analysis of the genomic sequence revealed the genetic potential to degrade these compounds.
从德国乌尔姆大学植物园的土壤样本中分离出一种革兰氏阳性、无运动性的细菌,该细菌呈现出细长且分支的细胞形态。在此,描述了该菌株的分离过程、鉴定、基因组测序和代谢特征。系统发育分析确定分离出的菌株为 属,该属属于 目内的 科。 的细胞长度根据生长阶段的不同,范围在1μm至15μm之间。在指数生长期,细胞呈现出细长且分支的形态,而在稳定生长期,细胞会分裂成圆形或类球菌状的元件。该基因组长度为4535074bp,由85个重叠群组成,包含3918个蛋白质编码基因和57个RNA基因。该分离菌株能够降解多种复杂的碳源,如纤维素、几丁质和淀粉,这些碳源在自然界中广泛存在。此外,对基因组序列的分析揭示了其降解这些化合物的遗传潜力。