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固氮酶中的簇组装

Cluster assembly in nitrogenase.

作者信息

Sickerman Nathaniel S, Rettberg Lee A, Lee Chi Chung, Hu Yilin, Ribbe Markus W

机构信息

Department of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697-3900, U.S.A.

Department of Chemistry, University of California, Irvine, CA 92697-3900, U.S.A.

出版信息

Essays Biochem. 2017 May 9;61(2):271-279. doi: 10.1042/EBC20160071.

Abstract

The versatile enzyme system nitrogenase accomplishes the challenging reduction of Nand other substrates through the use of two main metalloclusters. For molybdenum nitrogenase, the catalytic component NifDK contains the [FeS]-core P-cluster and a [MoFeSC-homocitrate] cofactor called the M-cluster. These chemically unprecedented metalloclusters play a critical role in the reduction of N, and both originate from [FeS] clusters produced by the actions of NifS and NifU. Maturation of P-cluster begins with a pair of these [FeS] clusters on NifDK called the P*-cluster. An accessory protein NifZ aids in P-cluster fusion, and reductive coupling is facilitated by NifH in a stepwise manner to form P-cluster on each half of NifDK. For M-cluster biosynthesis, two [FeS] clusters on NifB are coupled with a carbon atom in a radical-SAM dependent process, and concomitant addition of a 'ninth' sulfur atom generates the [FeSC]-core L-cluster. On the scaffold protein NifEN, L-cluster is matured to M-cluster by the addition of Mo and homocitrate provided by NifH. Finally, matured M-cluster in NifEN is directly transferred to NifDK, where a conformational change locks the cofactor in place. Mechanistic insights into these fascinating biosynthetic processes are detailed in this chapter.

摘要

多功能酶系统固氮酶通过使用两个主要的金属簇实现了对氮及其他底物具有挑战性的还原反应。对于钼固氮酶而言,催化组分NifDK包含[FeS]核心P簇和一个名为M簇的[MoFeSC - 高柠檬酸]辅因子。这些在化学上史无前例的金属簇在氮的还原过程中起着关键作用,并且两者均起源于由NifS和NifU的作用产生的[FeS]簇。P簇的成熟始于NifDK上一对被称为P*簇的[FeS]簇。辅助蛋白NifZ有助于P簇的融合,并且NifH以逐步的方式促进还原偶联,从而在NifDK的每一半上形成P簇。对于M簇的生物合成,NifB上的两个[FeS]簇在一个依赖于自由基SAM的过程中与一个碳原子偶联,并且伴随添加一个“第九个”硫原子生成[FeSC]核心L簇。在支架蛋白NifEN上,通过添加由NifH提供的钼和高柠檬酸,L簇成熟为M簇。最后,NifEN中成熟的M簇直接转移至NifDK,在那里构象变化将辅因子锁定在适当位置。本章详细阐述了这些迷人的生物合成过程的机理见解。

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