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水淹高温稠油油藏中代谢活跃菌的多样性

Diversity of Metabolically Active in Water-Flooded High-Temperature Heavy Oil Reservoir.

作者信息

Nazina Tamara N, Shestakova Natalya M, Semenova Ekaterina M, Korshunova Alena V, Kostrukova Nadezda K, Tourova Tatiana P, Min Liu, Feng Qingxian, Poltaraus Andrey B

机构信息

Laboratory of Petroleum Microbiology, Research Center of Biotechnology, Winogradsky Institute of Microbiology, Russian Academy of SciencesMoscow, Russia.

Dagang Oil Field Group Ltd.Tianjin, China.

出版信息

Front Microbiol. 2017 Apr 25;8:707. doi: 10.3389/fmicb.2017.00707. eCollection 2017.

Abstract

The goal of this work was to study the overall genomic diversity of microorganisms of the Dagang high-temperature oilfield (PRC) and to characterize the metabolically active fraction of these populations. At this water-flooded oilfield, the microbial community of formation water from the near-bottom zone of an injection well where the most active microbial processes of oil degradation occur was investigated using molecular, cultural, radiotracer, and physicochemical techniques. The samples of microbial DNA and RNA from back-flushed water were used to obtain the clone libraries for the 16S rRNA gene and cDNA of 16S rRNA, respectively. The DNA-derived clone libraries were found to contain bacterial and archaeal 16S rRNA genes and the B genes encoding alkane monooxygenases similar to those encoded by - and - of geobacilli. The 16S rRNA genes of methanogens (, and ) were predominant in the DNA-derived library of cloned sequences; among the bacterial sequences, the 16S rRNA genes of members of the genus were the most numerous. The RNA-derived library contained only bacterial cDNA of the 16S rRNA sequences belonging to metabolically active aerobic organotrophic bacteria (), as well as of denitrifying (), fermenting (), iron-reducing (), and sulfate- and sulfur-reducing bacteria (). The presence of the microorganisms of the main functional groups revealed by molecular techniques was confirmed by the results of cultural, radioisotope, and geochemical research. Functioning of the mesophilic and thermophilic branches was shown for the microbial food chain of the near-bottom zone of the injection well, which included the microorganisms of the carbon, sulfur, iron, and nitrogen cycles.

摘要

这项工作的目标是研究中国大港高温油田微生物的整体基因组多样性,并对这些微生物群体中具有代谢活性的部分进行特征描述。在这个注水油田,利用分子、培养、放射性示踪和物理化学技术,对注入井近井底区域地层水中的微生物群落进行了研究,该区域发生着最活跃的石油降解微生物过程。分别利用反冲洗水中的微生物DNA和RNA样本,获得了16S rRNA基因的克隆文库和16S rRNA的cDNA克隆文库。发现DNA来源的克隆文库包含细菌和古菌的16S rRNA基因,以及与嗜热栖热放线菌和嗜热栖热放线菌编码的烷烃单加氧酶相似的B基因。产甲烷菌(嗜热栖热放线菌、嗜热栖热放线菌和嗜热栖热放线菌)的16S rRNA基因在克隆序列的DNA来源文库中占主导地位;在细菌序列中,芽孢杆菌属成员的16S rRNA基因数量最多。RNA来源的文库仅包含属于代谢活跃的好氧有机营养细菌(嗜热栖热放线菌)、反硝化细菌(嗜热栖热放线菌)、发酵细菌(嗜热栖热放线菌)、铁还原细菌(嗜热栖热放线菌)以及硫酸盐和硫还原细菌(嗜热栖热放线菌)的16S rRNA序列的细菌cDNA。分子技术揭示的主要功能菌群的存在通过培养、放射性同位素和地球化学研究结果得到了证实。注入井近井底区域微生物食物链的中温分支和高温分支的功能得以展现,其中包括碳、硫、铁和氮循环的微生物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/96a7b00da2f0/fmicb-08-00707-g0001.jpg

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