• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

水淹高温稠油油藏中代谢活跃菌的多样性

Diversity of Metabolically Active in Water-Flooded High-Temperature Heavy Oil Reservoir.

作者信息

Nazina Tamara N, Shestakova Natalya M, Semenova Ekaterina M, Korshunova Alena V, Kostrukova Nadezda K, Tourova Tatiana P, Min Liu, Feng Qingxian, Poltaraus Andrey B

机构信息

Laboratory of Petroleum Microbiology, Research Center of Biotechnology, Winogradsky Institute of Microbiology, Russian Academy of SciencesMoscow, Russia.

Dagang Oil Field Group Ltd.Tianjin, China.

出版信息

Front Microbiol. 2017 Apr 25;8:707. doi: 10.3389/fmicb.2017.00707. eCollection 2017.

DOI:10.3389/fmicb.2017.00707
PMID:28487680
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5403907/
Abstract

The goal of this work was to study the overall genomic diversity of microorganisms of the Dagang high-temperature oilfield (PRC) and to characterize the metabolically active fraction of these populations. At this water-flooded oilfield, the microbial community of formation water from the near-bottom zone of an injection well where the most active microbial processes of oil degradation occur was investigated using molecular, cultural, radiotracer, and physicochemical techniques. The samples of microbial DNA and RNA from back-flushed water were used to obtain the clone libraries for the 16S rRNA gene and cDNA of 16S rRNA, respectively. The DNA-derived clone libraries were found to contain bacterial and archaeal 16S rRNA genes and the B genes encoding alkane monooxygenases similar to those encoded by - and - of geobacilli. The 16S rRNA genes of methanogens (, and ) were predominant in the DNA-derived library of cloned sequences; among the bacterial sequences, the 16S rRNA genes of members of the genus were the most numerous. The RNA-derived library contained only bacterial cDNA of the 16S rRNA sequences belonging to metabolically active aerobic organotrophic bacteria (), as well as of denitrifying (), fermenting (), iron-reducing (), and sulfate- and sulfur-reducing bacteria (). The presence of the microorganisms of the main functional groups revealed by molecular techniques was confirmed by the results of cultural, radioisotope, and geochemical research. Functioning of the mesophilic and thermophilic branches was shown for the microbial food chain of the near-bottom zone of the injection well, which included the microorganisms of the carbon, sulfur, iron, and nitrogen cycles.

摘要

这项工作的目标是研究中国大港高温油田微生物的整体基因组多样性,并对这些微生物群体中具有代谢活性的部分进行特征描述。在这个注水油田,利用分子、培养、放射性示踪和物理化学技术,对注入井近井底区域地层水中的微生物群落进行了研究,该区域发生着最活跃的石油降解微生物过程。分别利用反冲洗水中的微生物DNA和RNA样本,获得了16S rRNA基因的克隆文库和16S rRNA的cDNA克隆文库。发现DNA来源的克隆文库包含细菌和古菌的16S rRNA基因,以及与嗜热栖热放线菌和嗜热栖热放线菌编码的烷烃单加氧酶相似的B基因。产甲烷菌(嗜热栖热放线菌、嗜热栖热放线菌和嗜热栖热放线菌)的16S rRNA基因在克隆序列的DNA来源文库中占主导地位;在细菌序列中,芽孢杆菌属成员的16S rRNA基因数量最多。RNA来源的文库仅包含属于代谢活跃的好氧有机营养细菌(嗜热栖热放线菌)、反硝化细菌(嗜热栖热放线菌)、发酵细菌(嗜热栖热放线菌)、铁还原细菌(嗜热栖热放线菌)以及硫酸盐和硫还原细菌(嗜热栖热放线菌)的16S rRNA序列的细菌cDNA。分子技术揭示的主要功能菌群的存在通过培养、放射性同位素和地球化学研究结果得到了证实。注入井近井底区域微生物食物链的中温分支和高温分支的功能得以展现,其中包括碳、硫、铁和氮循环的微生物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/27e7a28d2631/fmicb-08-00707-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/96a7b00da2f0/fmicb-08-00707-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/7c60b26e48d6/fmicb-08-00707-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/d2485d7875bc/fmicb-08-00707-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/27e7a28d2631/fmicb-08-00707-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/96a7b00da2f0/fmicb-08-00707-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/7c60b26e48d6/fmicb-08-00707-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/d2485d7875bc/fmicb-08-00707-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3875/5403907/27e7a28d2631/fmicb-08-00707-g0004.jpg

相似文献

1
Diversity of Metabolically Active in Water-Flooded High-Temperature Heavy Oil Reservoir.水淹高温稠油油藏中代谢活跃菌的多样性
Front Microbiol. 2017 Apr 25;8:707. doi: 10.3389/fmicb.2017.00707. eCollection 2017.
2
Molecular phylogenetic diversity of the microbial community associated with a high-temperature petroleum reservoir at an offshore oilfield.某海上油田高温油藏相关微生物群落的分子系统发育多样性
FEMS Microbiol Ecol. 2007 Apr;60(1):74-84. doi: 10.1111/j.1574-6941.2006.00266.x. Epub 2007 Feb 7.
3
Phylogenetic diversity of microbial communities associated with the crude-oil, large-insoluble-particle and formation-water components of the reservoir fluid from a non-flooded high-temperature petroleum reservoir.与未水淹高温油藏储层流体中的原油、大不溶颗粒和地层水组分相关的微生物群落的系统发育多样性。
J Biosci Bioeng. 2012 Feb;113(2):204-10. doi: 10.1016/j.jbiosc.2011.09.015. Epub 2011 Oct 22.
4
Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs.与高温油藏相关的微生物群落的基于培养和非培养的特征分析。
Appl Environ Microbiol. 2000 Feb;66(2):700-11. doi: 10.1128/AEM.66.2.700-711.2000.
5
Microbial diversity and abundance in the Xinjiang Luliang long-term water-flooding petroleum reservoir.新疆陆梁长期注水油藏中的微生物多样性与丰度
Microbiologyopen. 2015 Apr;4(2):332-342. doi: 10.1002/mbo3.241. Epub 2015 Feb 2.
6
Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis.通过16S rRNA基因分析确定的中温及嗜热颗粒污泥的系统发育多样性
Microbiology (Reading). 1998 Sep;144 ( Pt 9):2655-2665. doi: 10.1099/00221287-144-9-2655.
7
Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations.印度东北部富含石油碳氢化合物的炼油厂污泥中蕴藏着厌氧、发酵、硫酸盐还原、共生和产甲烷微生物种群。
BMC Microbiol. 2018 Oct 22;18(1):151. doi: 10.1186/s12866-018-1275-8.
8
Comparison of bacterial community in aqueous and oil phases of water-flooded petroleum reservoirs using pyrosequencing and clone library approaches.运用焦磷酸测序法和克隆文库法比较水淹油藏水相和油相中的细菌群落
Appl Microbiol Biotechnol. 2014 May;98(9):4209-21. doi: 10.1007/s00253-013-5472-y. Epub 2014 Jan 11.
9
Massive dominance of Epsilonproteobacteria in formation waters from a Canadian oil sands reservoir containing severely biodegraded oil.在加拿大油砂储层的形成水中,发现了大量的变形菌门(Epsilonproteobacteria),这些水含有严重生物降解的石油。
Environ Microbiol. 2012 Feb;14(2):387-404. doi: 10.1111/j.1462-2920.2011.02521.x. Epub 2011 Aug 8.
10
Phylogenetic diversity of the archaeal community in a continental high-temperature, water-flooded petroleum reservoir.陆相高温水淹油藏中古菌群落的系统发育多样性
Curr Microbiol. 2007 Nov;55(5):382-8. doi: 10.1007/s00284-007-9002-y. Epub 2007 Aug 9.

引用本文的文献

1
Metagenomic and Culture-Based Analyses of Microbial Communities from Petroleum Reservoirs with High-Salinity Formation Water, and Their Biotechnological Potential.对高盐地层水油藏微生物群落的宏基因组学和基于培养的分析及其生物技术潜力
Biology (Basel). 2023 Oct 2;12(10):1300. doi: 10.3390/biology12101300.
2
Microbial communities succession post to polymer flood demonstrate a role in enhanced oil recovery.聚合物驱后微生物群落演替在提高原油采收率中发挥作用。
Appl Microbiol Biotechnol. 2023 Sep;107(17):5531-5544. doi: 10.1007/s00253-023-12673-3. Epub 2023 Jul 10.
3
A Review on Biotechnological Approaches Applied for Marine Hydrocarbon Spills Remediation.

本文引用的文献

1
Fractal Hypothesis of the Pelagic Microbial Ecosystem-Can Simple Ecological Principles Lead to Self-Similar Complexity in the Pelagic Microbial Food Web?海洋微生物生态系统的分形假说——简单的生态原理能否导致海洋微生物食物网中的自相似复杂性?
Front Microbiol. 2015 Dec 1;6:1357. doi: 10.3389/fmicb.2015.01357. eCollection 2015.
2
Phylogeny and physiology of candidate phylum 'Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics.基于非培养基因组学推断的候选门“无定形杆菌”(OP9/JS1)的系统发育和生理学
ISME J. 2016 Feb;10(2):273-86. doi: 10.1038/ismej.2015.97. Epub 2015 Jun 19.
3
Anaerolineaceae and Methanosaeta turned to be the dominant microorganisms in alkanes-dependent methanogenic culture after long-term of incubation.
海洋溢油修复生物技术应用综述
Microorganisms. 2022 Jun 25;10(7):1289. doi: 10.3390/microorganisms10071289.
4
Bioemulsification and Microbial Community Reconstruction in Thermally Processed Crude Oil.热加工原油中的生物乳化与微生物群落重建
Microorganisms. 2021 Sep 29;9(10):2054. doi: 10.3390/microorganisms9102054.
5
Sulfidogenic Microbial Communities of the Uzen High-Temperature Oil Field in Kazakhstan.哈萨克斯坦乌津高温油田的产硫微生物群落
Microorganisms. 2021 Aug 26;9(9):1818. doi: 10.3390/microorganisms9091818.
6
Genome-Resolved Meta-Analysis of the Microbiome in Oil Reservoirs Worldwide.全球油藏微生物群落的基因组解析荟萃分析。
Microorganisms. 2021 Aug 26;9(9):1812. doi: 10.3390/microorganisms9091812.
7
Elucidate microbial characteristics in a full-scale treatment plant for offshore oil produced wastewater.阐明海上采油废水全规模处理厂中的微生物特性。
PLoS One. 2021 Aug 12;16(8):e0255836. doi: 10.1371/journal.pone.0255836. eCollection 2021.
8
A review on anaerobic microorganisms isolated from oil reservoirs.从油藏中分离出的厌氧微生物综述。
World J Microbiol Biotechnol. 2021 Jun 2;37(7):111. doi: 10.1007/s11274-021-03080-9.
9
sp. nov., a Fermenting Bacterium Isolated from a Petroleum Reservoir in Azerbaijan, and Emended Description of the Genus .新种,一种从阿塞拜疆石油储层分离出的发酵细菌,以及对该属的修订描述。
Microorganisms. 2020 Dec 11;8(12):1967. doi: 10.3390/microorganisms8121967.
10
Denitrification characterization of dissolved oxygen microprofiles in lake surface sediment through analyzing abundance, expression, community composition and enzymatic activities of denitrifier functional genes.通过分析反硝化细菌功能基因的丰度、表达、群落组成和酶活性,对湖泊表层沉积物中溶解氧微剖面的反硝化特性进行研究。
AMB Express. 2019 Aug 19;9(1):129. doi: 10.1186/s13568-019-0855-9.
经过长期培养后,厌氧绳菌科和甲烷八叠球菌属成为依赖烷烃产甲烷培养物中的优势微生物。
AMB Express. 2015 Dec;5(1):117. doi: 10.1186/s13568-015-0117-4. Epub 2015 Jun 18.
4
Life in the slow lane; biogeochemistry of biodegraded petroleum containing reservoirs and implications for energy recovery and carbon management.在缓慢车道上的生活;含降解石油的生物地球化学特征及其对能源回收和碳管理的影响。
Front Microbiol. 2014 Nov 11;5:566. doi: 10.3389/fmicb.2014.00566. eCollection 2014.
5
rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development.rrnDB:用于解释细菌和古细菌中rRNA基因丰度的改进工具以及未来发展的新基础。
Nucleic Acids Res. 2015 Jan;43(Database issue):D593-8. doi: 10.1093/nar/gku1201. Epub 2014 Nov 20.
6
Abundance and diversity of soil petroleum hydrocarbon-degrading microbial communities in oil exploring areas.石油勘探区土壤石油烃降解微生物群落的丰度和多样性。
Appl Microbiol Biotechnol. 2015 Feb;99(4):1935-46. doi: 10.1007/s00253-014-6074-z. Epub 2014 Sep 20.
7
Comparison of bacterial community in aqueous and oil phases of water-flooded petroleum reservoirs using pyrosequencing and clone library approaches.运用焦磷酸测序法和克隆文库法比较水淹油藏水相和油相中的细菌群落
Appl Microbiol Biotechnol. 2014 May;98(9):4209-21. doi: 10.1007/s00253-013-5472-y. Epub 2014 Jan 11.
8
Metagenomics of hydrocarbon resource environments indicates aerobic taxa and genes to be unexpectedly common.烃类资源环境的宏基因组学表明,好氧分类群和基因出人意料地普遍存在。
Environ Sci Technol. 2013 Sep 17;47(18):10708-17. doi: 10.1021/es4020184. Epub 2013 Aug 26.
9
Insights into the phylogeny and coding potential of microbial dark matter.微生物暗物质的系统发育和编码潜力的研究进展
Nature. 2013 Jul 25;499(7459):431-7. doi: 10.1038/nature12352. Epub 2013 Jul 14.
10
Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses.评估 rRNA 作为环境群落中微生物活性的指标:限制与应用。
ISME J. 2013 Nov;7(11):2061-8. doi: 10.1038/ismej.2013.102. Epub 2013 Jul 4.