携带CTX-M-15超广谱β-内酰胺酶基因的两个噬菌体样质粒的全基因组序列
Complete Genome Sequences of Two Phage-Like Plasmids Carrying the CTX-M-15 Extended-Spectrum β-Lactamase Gene.
作者信息
Colavecchio Anna, Jeukens Julie, Freschi Luca, Edmond Rheault Jean-Guillaume, Kukavica-Ibrulj Irena, Levesque Roger C, LeJeune Jeffrey, Goodridge Lawrence
机构信息
Department of Food Science and Agricultural Chemistry, Food Safety and Quality Program, McGill University, Ste-Anne-de-Bellevue, Canada.
Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, Canada.
出版信息
Genome Announc. 2017 May 11;5(19):e00102-17. doi: 10.1128/genomeA.00102-17.
Abstract
Two similar phage-like plasmids carrying CTX-M-15 resistance cassettes were identified from two environmental isolates. They demonstrate strong nucleotide sequence identity to the phage-like plasmid pECOH89 and bacteriophage SSU5.
摘要
从两个环境分离株中鉴定出两个携带CTX-M-15耐药盒的类似噬菌体的质粒。它们与类似噬菌体的质粒pECOH89和噬菌体SSU5具有很强的核苷酸序列同一性。
相似文献
1
Complete Genome Sequences of Two Phage-Like Plasmids Carrying the CTX-M-15 Extended-Spectrum β-Lactamase Gene.携带CTX-M-15超广谱β-内酰胺酶基因的两个噬菌体样质粒的全基因组序列
Genome Announc. 2017 May 11;5(19):e00102-17. doi: 10.1128/genomeA.00102-17.
2
Complete Genome Sequence of Phage-Like Plasmid pECOH89, Encoding CTX-M-15.编码CTX-M-15的噬菌体样质粒pECOH89的全基因组序列
Genome Announc. 2014 Apr 24;2(2):e00356-14. doi: 10.1128/genomeA.00356-14.
3
Complete Sequence of pCY-CTX, a Plasmid Carrying a Phage-Like Region and an ISEcp1-Mediated Tn2 Element from Enterobacter cloacae.携带类噬菌体区域和来自阴沟肠杆菌的ISEcp1介导的Tn2元件的质粒pCY-CTX的完整序列
Microb Drug Resist. 2018 Apr;24(3):307-313. doi: 10.1089/mdr.2017.0146. Epub 2017 Sep 6.
4
Competition between Escherichia coli Populations with and without Plasmids Carrying a Gene Encoding Extended-Spectrum Beta-Lactamase in the Broiler Chicken Gut.携带有编码扩展谱β-内酰胺酶基因的质粒的大肠杆菌种群与不带质粒的大肠杆菌种群在肉鸡肠道中的竞争。
Appl Environ Microbiol. 2019 Aug 14;85(17). doi: 10.1128/AEM.00892-19. Print 2019 Sep 1.
5
IncI1 plasmids carrying bla(CTX-M-1) or bla(CMY-2) genes in Escherichia coli from healthy humans and animals in Tunisia.来自突尼斯健康人和动物的大肠杆菌中携带bla(CTX-M-1)或bla(CMY-2)基因的IncI1质粒。
Microb Drug Resist. 2014 Oct;20(5):495-500. doi: 10.1089/mdr.2013.0224. Epub 2014 May 14.
6
Complete nucleotide sequence of the IncI1 plasmid pSH4469 encoding CTX-M-15 extended-spectrum β-lactamase in a clinical isolate of Shigella sonnei from an outbreak in the Republic of Korea.韩国一起志贺氏菌病暴发分离株中携带 CTX-M-15 超广谱β-内酰胺酶的 IncI1 型质粒 pSH4469 的全核苷酸序列。
Int J Antimicrob Agents. 2014 Dec;44(6):533-7. doi: 10.1016/j.ijantimicag.2014.08.007. Epub 2014 Sep 28.
7
Characterization of IncN plasmids carrying bla CTX-M-1 and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans.动物、环境和人类源携带 bla CTX-M-1 和 qnr 基因的 IncN 质粒的特征。
J Antimicrob Chemother. 2013 Feb;68(2):333-9. doi: 10.1093/jac/dks387. Epub 2012 Oct 11.
8
Increased detection of extended spectrum beta-lactamase producing Salmonella enterica and Escherichia coli isolates from poultry.从家禽中检测到更多的产超广谱β-内酰胺酶的沙门氏菌和大肠杆菌分离株。
Vet Microbiol. 2010 Oct 26;145(3-4):273-8. doi: 10.1016/j.vetmic.2010.03.019. Epub 2010 Mar 27.
9
Molecular characterization of extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella spp. isolates in Mongolia.蒙古产超广谱β-内酰胺酶的大肠杆菌和克雷伯菌属分离株的分子特征。
J Microbiol Immunol Infect. 2016 Oct;49(5):692-700. doi: 10.1016/j.jmii.2015.05.009. Epub 2015 Jun 27.
10
Different IncI1 plasmids from Escherichia coli carry ISEcp1-blaCTX-M-15 associated with different Tn2-derived elements.来自大肠杆菌的不同IncI1质粒携带与不同Tn2衍生元件相关的ISEcp1-blaCTX-M-15。
Plasmid. 2015 Jul;80:118-26. doi: 10.1016/j.plasmid.2015.04.007. Epub 2015 Apr 27.
引用本文的文献
1
Emerging multi-drug resistant and extended-spectrum β-lactamase (ESBL)-positive enterotoxigenic (ETEC) clones circulating in aquatic environments and in patients.在水生环境和患者中传播的新型多重耐药和超广谱β-内酰胺酶（ESBL）阳性产肠毒素大肠杆菌（ETEC）克隆。
One Health. 2025 Jan 10;20:100968. doi: 10.1016/j.onehlt.2025.100968. eCollection 2025 Jun.
2
Phylogenomics of novel clones of recovered from a freshwater lake reveals unique biosynthetic gene clusters.从一个淡水湖中分离出的新型克隆的系统发育基因组学揭示了独特的生物合成基因簇。
Microbiol Spectr. 2024 Nov 8;12(12):e0117124. doi: 10.1128/spectrum.01171-24.
3
Presence of phage-plasmids in multiple serovars of .在 . 的多个血清型中存在噬菌体-质粒。
Microb Genom. 2024 May;10(5). doi: 10.1099/mgen.0.001247.
4
Holistic Strategies to Control Infantis: An Emerging Challenge in the European Broiler Sector.控制雏鸡的整体策略：欧洲肉鸡行业面临的新挑战
Microorganisms. 2023 Jul 6;11(7):1765. doi: 10.3390/microorganisms11071765.
5
Dominance of phage particles carrying antibiotic resistance genes in the viromes of retail food sources.噬菌体颗粒携带抗生素抗性基因在零售食品来源的病毒组中占主导地位。
ISME J. 2023 Feb;17(2):195-203. doi: 10.1038/s41396-022-01338-0. Epub 2022 Oct 26.
6
Phage-Plasmids Spread Antibiotic Resistance Genes through Infection and Lysogenic Conversion.噬菌体-质粒通过感染和溶原性转换传播抗生素抗性基因。
mBio. 2022 Oct 26;13(5):e0185122. doi: 10.1128/mbio.01851-22. Epub 2022 Sep 26.
7
Similarities of P1-Like Phage Plasmids and Their Role in the Dissemination of .P1 样噬菌体质粒的相似性及其在. 传播中的作用
Microbiol Spectr. 2022 Oct 26;10(5):e0141022. doi: 10.1128/spectrum.01410-22. Epub 2022 Sep 7.
8
Abundance of antibiotic resistance genes in bacteria and bacteriophages isolated from wastewater in Shiraz.设拉子市废水中分离出的细菌和噬菌体中抗生素抗性基因的丰度
Mol Biol Res Commun. 2021 Jun;10(2):73-83. doi: 10.22099/mbrc.2021.39468.1584.
9
Long-read-sequenced reference genomes of the seven major lineages of enterotoxigenic Escherichia coli (ETEC) circulating in modern time.现代传播的肠致病性大肠杆菌（ETEC）的七个主要谱系的长读测序参考基因组。
Sci Rep. 2021 Apr 29;11(1):9256. doi: 10.1038/s41598-021-88316-2.
10
Repeated Isolation of Extended-Spectrum-β-Lactamase-Positive Sequence Types 648 and 131 from Community Wastewater Indicates that Sewage Systems Are Important Sources of Emerging Clones of Antibiotic-Resistant Bacteria.从社区污水中反复分离出产超广谱β-内酰胺酶的序列类型 648 和 131，表明污水系统是抗生素耐药菌新兴克隆的重要来源。
Antimicrob Agents Chemother. 2019 Aug 23;63(9). doi: 10.1128/AAC.00823-19. Print 2019 Sep.
本文引用的文献
1
PHASTER: a better, faster version of the PHAST phage search tool.PHASTER：PHAST噬菌体搜索工具的一个更好、更快的版本。
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21. doi: 10.1093/nar/gkw387. Epub 2016 May 3.
2
Antibiotic resistance and extended spectrum beta-lactamases: Types, epidemiology and treatment.抗生素耐药性与超广谱β-内酰胺酶：类型、流行病学及治疗
Saudi J Biol Sci. 2015 Jan;22(1):90-101. doi: 10.1016/j.sjbs.2014.08.002. Epub 2014 Aug 17.
3
Characterization of a P1-like bacteriophage carrying an SHV-2 extended-spectrum β-lactamase from an Escherichia coli strain.一株携带SHV-2超广谱β-内酰胺酶的大肠杆菌中类P1噬菌体的特性分析
Antimicrob Agents Chemother. 2014 Nov;58(11):6550-7. doi: 10.1128/AAC.03183-14. Epub 2014 Aug 18.
4
Applying the ResFinder and VirulenceFinder web-services for easy identification of acquired antibiotic resistance and virulence genes in bacteriophage and prophage nucleotide sequences.应用ResFinder和VirulenceFinder网络服务轻松鉴定噬菌体和前噬菌体核苷酸序列中获得的抗生素抗性基因和毒力基因。
Bacteriophage. 2014 Jan 1;4(1):e27943. doi: 10.4161/bact.27943. Epub 2014 Jan 22.
5
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).SEED 与利用子系统技术进行快速微生物基因组注释（RAST）。
Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.
6
Could bacteriophages transfer antibiotic resistance genes from environmental bacteria to human-body associated bacterial populations?噬菌体能否将抗生素抗性基因从环境细菌转移至与人体相关的细菌群体？
Mob Genet Elements. 2013 Jul 1;3(4):e25847. doi: 10.4161/mge.25847. Epub 2013 Aug 2.
7
An integrated pipeline for de novo assembly of microbial genomes.用于从头组装微生物基因组的集成管道。
PLoS One. 2012;7(9):e42304. doi: 10.1371/journal.pone.0042304. Epub 2012 Sep 13.
8
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies.PhiSpy：一种新型算法，用于在细菌基因组中寻找噬菌体，该算法结合了基于相似性和组成的策略。
Nucleic Acids Res. 2012 Sep;40(16):e126. doi: 10.1093/nar/gks406. Epub 2012 May 14.
9
CTX-M Enzymes: Origin and Diffusion.CTX-M 酶：起源与传播
Front Microbiol. 2012 Apr 2;3:110. doi: 10.3389/fmicb.2012.00110. eCollection 2012.
10
Bacteriophages carrying antibiotic resistance genes in fecal waste from cattle, pigs, and poultry.粪便中携带抗生素耐药基因的噬菌体来自牛、猪和家禽。
Antimicrob Agents Chemother. 2011 Oct;55(10):4908-11. doi: 10.1128/AAC.00535-11. Epub 2011 Aug 1.
Zotero 插件