• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于蛋白质观测氟核磁共振的顺磁弛豫增强作为高效片段筛选的一种可行方法。

Paramagnetic relaxation enhancement for protein-observed F NMR as an enabling approach for efficient fragment screening.

作者信息

Hawk Laura M L, Gee Clifford T, Urick Andrew K, Hu Haitao, Pomerantz William C K

机构信息

Department of Chemistry, University of Minnesota, 207 Pleasant St. SE, Minneapolis, MN 55455, United States.

Lilly Research Laboratories, Eli Lilly and Company, Lilly Corporate Center, Indianapolis, IN 46285, United States.

出版信息

RSC Adv. 2016;6(98):95715-95721. doi: 10.1039/C6RA21226C. Epub 2016 Sep 29.

DOI:10.1039/C6RA21226C
PMID:28496971
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5421645/
Abstract

Protein-observed F (PrOF) NMR is an emerging tool for ligand discovery. To optimize the efficiency of PrOF NMR experiments, paramagnetic relaxation enhancement through the addition of chelated Ni(II) was used to shorten longitudinal relaxation time without causing significant line broadening. Thus enhancing relaxation time leads to shorter experiments without perturbing the binding of low- or high-affinity ligands. This method allows for time-efficient screening of potential ligands for a wide variety of proteins in the growing field of fragment-based ligand discovery.

摘要

蛋白质观测F(PrOF)核磁共振是一种新兴的配体发现工具。为了优化PrOF核磁共振实验的效率,通过添加螯合的Ni(II)来实现顺磁弛豫增强,以缩短纵向弛豫时间,同时不会导致明显的谱线展宽。因此,增强弛豫时间可使实验时间缩短,而不会干扰低亲和力或高亲和力配体的结合。这种方法能够在基于片段的配体发现这一不断发展的领域中,对多种蛋白质的潜在配体进行高效的时间筛选。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/7a4dbe5d3c90/nihms821533f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/baae2d2e6446/nihms821533f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/9ff5bd3751b0/nihms821533f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/7a4dbe5d3c90/nihms821533f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/baae2d2e6446/nihms821533f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/9ff5bd3751b0/nihms821533f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c88c/5421645/7a4dbe5d3c90/nihms821533f3.jpg

相似文献

1
Paramagnetic relaxation enhancement for protein-observed F NMR as an enabling approach for efficient fragment screening.用于蛋白质观测氟核磁共振的顺磁弛豫增强作为高效片段筛选的一种可行方法。
RSC Adv. 2016;6(98):95715-95721. doi: 10.1039/C6RA21226C. Epub 2016 Sep 29.
2
Efficient affinity ranking of fluorinated ligands by F NMR: CSAR and FastCSAR.通过氟 NMR 进行高效氟配体亲和性排序:CSAR 和 FastCSAR。
J Biomol NMR. 2020 Nov;74(10-11):579-594. doi: 10.1007/s10858-020-00325-x. Epub 2020 Jun 16.
3
F NMR transverse and longitudinal relaxation filter experiments for screening: a theoretical and experimental analysis.用于筛选的F NMR横向和纵向弛豫滤波器实验:理论与实验分析
Magn Reson Chem. 2017 Feb;55(2):106-114. doi: 10.1002/mrc.4500. Epub 2016 Sep 28.
4
Combined Protein- and Ligand-Observed NMR Workflow to Screen Fragment Cocktails against Multiple Proteins: A Case Study Using Bromodomains.基于蛋白和配体的 NMR 联合筛选方法在多种蛋白上筛选小分子片段库:以溴结构域为例的研究
Molecules. 2020 Aug 29;25(17):3949. doi: 10.3390/molecules25173949.
5
31P NMR probes of chemical dynamics: paramagnetic relaxation enhancement of the (1)H and (31)P NMR resonances of methyl phosphite and methylethyl phosphate anions by selected metal complexes.化学动力学的31P NMR探针:特定金属配合物对亚磷酸甲酯和磷酸甲乙酯阴离子的(1)H和(31)P NMR共振的顺磁弛豫增强作用
Inorg Chem. 2001 Dec 17;40(26):6547-54. doi: 10.1021/ic010728w.
6
SAR by (Protein-Observed) F NMR.(基于观察到的蛋白的)F NMR 的 SAR。
Acc Chem Res. 2019 Dec 17;52(12):3407-3418. doi: 10.1021/acs.accounts.9b00377. Epub 2019 Nov 13.
7
Paramagnetic relaxation enhancement to improve sensitivity of fast NMR methods: application to intrinsically disordered proteins.顺磁弛豫增强提高快速 NMR 方法的灵敏度:在天然无序蛋白中的应用。
J Biomol NMR. 2011 Dec;51(4):487-95. doi: 10.1007/s10858-011-9577-2. Epub 2011 Oct 19.
8
NMR characterization of weak interactions between RhoGDI2 and fragment screening hits.利用 NMR 技术对 RhoGDI2 与片段筛选命中物之间的弱相互作用进行表征。
Biochim Biophys Acta Gen Subj. 2017 Jan;1861(1 Pt A):3061-3070. doi: 10.1016/j.bbagen.2016.10.003. Epub 2016 Oct 6.
9
Process of Fragment-Based Lead Discovery-A Perspective from NMR.基于片段的先导化合物发现过程——核磁共振视角
Molecules. 2016 Jul 16;21(7):854. doi: 10.3390/molecules21070854.
10
Sensitivity enhancement of multidimensional NMR experiments by paramagnetic relaxation effects.通过顺磁弛豫效应增强多维核磁共振实验的灵敏度
J Am Chem Soc. 2006 Oct 18;128(41):13474-8. doi: 10.1021/ja0634526.

引用本文的文献

1
Fragment-Based Ligand Discovery Using Protein-Observed F NMR: A Second Semester Organic Chemistry CURE Project.利用蛋白质观测的氟核磁共振进行基于片段的配体发现:一个有机化学第二学期的探究式学习项目
J Chem Educ. 2021 Jun 8;98(6):1963-1973. doi: 10.1021/acs.jchemed.1c00028. Epub 2021 May 11.
2
Rapid Quantification of Protein-Ligand Binding via F NMR Lineshape Analysis.通过F NMR线形分析快速定量蛋白质-配体结合
Biophys J. 2020 May 19;118(10):2537-2548. doi: 10.1016/j.bpj.2020.03.031. Epub 2020 Apr 15.
3
2-Fluorotyrosine is a valuable but understudied amino acid for protein-observed F NMR.2-氟酪氨酸是一种用于蛋白质观察 F NMR 的有价值但研究不足的氨基酸。
J Biomol NMR. 2020 Jan;74(1):61-69. doi: 10.1007/s10858-019-00290-0. Epub 2019 Nov 23.
4
SAR by (Protein-Observed) F NMR.(基于观察到的蛋白的)F NMR 的 SAR。
Acc Chem Res. 2019 Dec 17;52(12):3407-3418. doi: 10.1021/acs.accounts.9b00377. Epub 2019 Nov 13.
5
Fast NMR Screening of Macromolecular Complexes by a Paramagnetic Spin Relaxation Filter.通过顺磁自旋弛豫滤波器对大分子复合物进行快速核磁共振筛选
ACS Omega. 2018 Mar 12;3(3):2974-2983. doi: 10.1021/acsomega.7b02074. eCollection 2018 Mar 31.
6
Protein-Engineered Nanoscale Micelles for Dynamic F Magnetic Resonance and Therapeutic Drug Delivery.用于动态 F 磁共振和治疗性药物递送的蛋白质工程纳米级胶束。
ACS Nano. 2019 Mar 26;13(3):2969-2985. doi: 10.1021/acsnano.8b07481. Epub 2019 Feb 19.
7
Hydrolysis, polarity, and conformational impact of C-terminal partially fluorinated ethyl esters in peptide models.肽模型中C端部分氟化乙酯的水解、极性和构象影响
Beilstein J Org Chem. 2017 Nov 16;13:2442-2457. doi: 10.3762/bjoc.13.241. eCollection 2017.
8
Meeting Proceedings ICBS2016-Translating the Power of Chemical Biology to Clinical Advances.会议论文集ICBS2016——将化学生物学的力量转化为临床进展
ACS Chem Biol. 2017 Apr 21;12(4):869-877. doi: 10.1021/acschembio.7b00205. Epub 2017 Mar 17.

本文引用的文献

1
Protein-observed (19)F-NMR for fragment screening, affinity quantification and druggability assessment.基于蛋白观测的 (19)F-NMR 在碎片筛选、亲和力定量和成药性评估中的应用。
Nat Protoc. 2016 Aug;11(8):1414-27. doi: 10.1038/nprot.2016.079. Epub 2016 Jul 14.
2
NMR-based platform for fragment-based lead discovery used in screening BRD4-targeted compounds.用于筛选靶向BRD4化合物的基于核磁共振的片段药物发现平台。
Acta Pharmacol Sin. 2016 Jul;37(7):984-93. doi: 10.1038/aps.2016.19. Epub 2016 May 30.
3
Fragment-Based Discovery of a Selective and Cell-Active Benzodiazepinone CBP/EP300 Bromodomain Inhibitor (CPI-637).基于片段的选择性细胞活性苯二氮卓酮CBP/EP300溴结构域抑制剂(CPI-637)的发现
ACS Med Chem Lett. 2016 Mar 15;7(5):531-6. doi: 10.1021/acsmedchemlett.6b00075. eCollection 2016 May 12.
4
Paramagnetic fluorinated nanoemulsions for sensitive cellular fluorine-19 magnetic resonance imaging.用于灵敏细胞氟-19磁共振成像的顺磁性氟化纳米乳剂
Nat Mater. 2016 Jun;15(6):662-8. doi: 10.1038/nmat4585. Epub 2016 Mar 14.
5
Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.基于结构的体内活性选择性BRD9抑制剂设计
J Med Chem. 2016 May 26;59(10):4462-75. doi: 10.1021/acs.jmedchem.5b01865. Epub 2016 Mar 10.
6
Protein-Observed Fluorine NMR: A Bioorthogonal Approach for Small Molecule Discovery.蛋白质观测氟核磁共振:一种用于小分子发现的生物正交方法。
J Med Chem. 2016 Jun 9;59(11):5158-71. doi: 10.1021/acs.jmedchem.5b01447. Epub 2015 Dec 14.
7
Increasing the sensitivity of NMR diffusion measurements by paramagnetic longitudinal relaxation enhancement, with application to ribosome-nascent chain complexes.通过顺磁纵向弛豫增强提高核磁共振扩散测量的灵敏度及其在核糖体-新生链复合物中的应用
J Biomol NMR. 2015 Oct;63(2):151-163. doi: 10.1007/s10858-015-9968-x. Epub 2015 Aug 8.
8
Dual Screening of BPTF and Brd4 Using Protein-Observed Fluorine NMR Uncovers New Bromodomain Probe Molecules.利用蛋白质观测氟核磁共振对BPTF和Brd4进行双重筛选,发现新型溴结构域探针分子。
ACS Chem Biol. 2015 Oct 16;10(10):2246-56. doi: 10.1021/acschembio.5b00483. Epub 2015 Jul 28.
9
Structural Insights into the Dynamic Process of β2-Adrenergic Receptor Signaling.β2-肾上腺素能受体信号转导动态过程的结构见解
Cell. 2015 May 21;161(5):1101-1111. doi: 10.1016/j.cell.2015.04.043. Epub 2015 May 14.
10
Fragment screening and druggability assessment for the CBP/p300 KIX domain through protein-observed 19F NMR spectroscopy.通过蛋白质观测19F核磁共振光谱对CBP/p300 KIX结构域进行片段筛选和药物可及性评估。
Angew Chem Int Ed Engl. 2015 Mar 16;54(12):3735-9. doi: 10.1002/anie.201411658. Epub 2015 Feb 4.