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用于韩国分离株快速分型的聚合酶链反应-限制性片段长度多态性分析

PCR-RFLP for Rapid Subtyping of Korean Isolates.

作者信息

Kang Jung-Mi, Lee Jinyoung, Kim Tae Im, Koh Eun-Ha, Kim Tong-Soo, Sohn Woon-Mok, Na Byoung-Kuk

机构信息

Department of Parasitology and Tropical Medicine, and Institute of Health Sciences, Gyeongsang National University School of Medicine, Jinju 52727, Korea.

BK21Plus Team for Anti-aging Biotechnology and Industry, Department of Convergence Medical Science, Gyeongsang National University, Jinju 52727, Korea.

出版信息

Korean J Parasitol. 2017 Apr;55(2):159-165. doi: 10.3347/kjp.2017.55.2.159. Epub 2017 Apr 30.

DOI:10.3347/kjp.2017.55.2.159
PMID:28506038
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5450958/
Abstract

Vivax malaria reemerged in Korea in 1993 and the outbreak has been continued with fluctuating numbers of annual indigenous cases. Understanding the nature of the genetic population of circulating in Korea is beneficial for the knowledge of the nationwide parasite heterogeneity and in the implementation of malaria control programs in the country. Previously, we analyzed polymorphic nature of merozoite surface protein-1 (MSP-1) and MSP-3α in Korean population and identified the Korean population has been diversifying rapidly, with the appearance of parasites with new genetic subtypes, despite the recent reduction of the disease incidence. In the present study, we developed simple PCR-RFLP methods for rapid subtyping of MSP-1 and MSP-3α of Korean isolates. These PCR-RFLP methods were able to easily distinguish each subtype of Korean MSP-1 and MSP-3α with high accuracy. The PCR-RFLP subtyping methods developed here would be easily applied to massive epidemiological studies for molecular surveillance to understand genetic population of and to supervise the genetic variation of the parasite circulating in Korea.

摘要

间日疟于1993年在韩国再次出现,疫情持续,每年本土病例数波动。了解韩国流行的间日疟原虫遗传群体的性质,有助于了解全国寄生虫的异质性,并有助于在该国实施疟疾控制计划。此前,我们分析了韩国人群中裂殖子表面蛋白-1(MSP-1)和MSP-3α的多态性,发现尽管近期疾病发病率有所下降,但韩国人群仍在迅速分化,出现了具有新遗传亚型的寄生虫。在本研究中,我们开发了简单的PCR-RFLP方法,用于快速鉴定韩国分离株的MSP-1和MSP-3α亚型。这些PCR-RFLP方法能够轻松、准确地区分韩国MSP-1和MSP-3α的各亚型。这里开发的PCR-RFLP亚型分析方法将很容易应用于大规模流行病学研究,用于分子监测,以了解韩国间日疟原虫的遗传群体,并监测在韩国流行的寄生虫的遗传变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/4c2072b746f0/kjp-55-2-159f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/6c751ec99356/kjp-55-2-159f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/7d481b2793a8/kjp-55-2-159f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/3c4eef3478de/kjp-55-2-159f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/4c2072b746f0/kjp-55-2-159f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/6c751ec99356/kjp-55-2-159f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/7d481b2793a8/kjp-55-2-159f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/3c4eef3478de/kjp-55-2-159f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/386b/5450958/4c2072b746f0/kjp-55-2-159f4.jpg

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Malar J. 2016 Sep 23;15(1):492. doi: 10.1186/s12936-016-1524-y.
2
Dynamic changes of Plasmodium vivax population structure in South Korea.韩国间日疟原虫种群结构的动态变化
Infect Genet Evol. 2016 Nov;45:90-94. doi: 10.1016/j.meegid.2016.08.023. Epub 2016 Aug 22.
3
Further Evidence of Increasing Diversity of Plasmodium vivax in the Republic of Korea in Recent Years.近年来韩国间日疟原虫多样性增加的进一步证据。
PLoS One. 2016 Mar 18;11(3):e0151514. doi: 10.1371/journal.pone.0151514. eCollection 2016.
4
Population genetic structure and natural selection of apical membrane antigen-1 in Plasmodium vivax Korean isolates.间日疟原虫韩国分离株顶膜抗原-1的群体遗传结构与自然选择
Malar J. 2015 Nov 16;14:455. doi: 10.1186/s12936-015-0942-6.
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The unique distribution of the Plasmodium vivax merozoite surface protein 1 in parasite isolates with short and long latent periods from the Republic of Korea.韩国间日疟原虫裂殖子表面蛋白1在潜伏期长短不同的寄生虫分离株中的独特分布。
Malar J. 2015 Aug 5;14:299. doi: 10.1186/s12936-015-0803-3.
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