Piya Sarbottam, Kihm Christina, Rice J Hollis, Baum Thomas J, Hewezi Tarek
Department of Plant Sciences, University of Tennessee, Knoxville, Tennessee 37996.
Department of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011.
Plant Physiol. 2017 Jul;174(3):1897-1912. doi: 10.1104/pp.17.00273. Epub 2017 May 16.
MicroRNAs (miRNAs) recently have been established as key regulators of transcriptome reprogramming that define cell function and identity. Nevertheless, the molecular functions of the greatest number of miRNA genes remain to be determined. Here, we report cooperative regulatory functions of miR858 and its MYB83 transcription factor target gene in transcriptome reprogramming during cyst nematode parasitism of Arabidopsis (). Gene expression analyses and promoter-GUS fusion assays documented a role of miR858 in posttranscriptional regulation of in the induced feeding sites, the syncytia. Constitutive overexpression of miR858 interfered with parasitism of Arabidopsis, leading to reduced susceptibility, while reduced miR858 abundance enhanced plant susceptibility. Similarly, expression increases were conducive to nematode infection because overexpression of a noncleavable coding sequence of significantly increased plant susceptibility, whereas a mutation rendered the plants less susceptible. In addition, RNA-seq analysis revealed that genes involved in hormone signaling pathways, defense response, glucosinolate biosynthesis, cell wall modification, sugar transport, and transcriptional control are the key etiological factors by which MYB83 facilitates nematode parasitism of Arabidopsis. Furthermore, we discovered that miR858-mediated silencing of is tightly regulated through a feedback loop that might contribute to fine-tuning the expression of more than a thousand of MYB83-regulated genes in the -induced syncytium. Together, our results suggest a role of the miR858-MYB83 regulatory system in finely balancing gene expression patterns during parasitism of Arabidopsis to ensure optimal cellular function.
微小RNA(miRNA)最近已被确立为转录组重编程的关键调节因子,这些重编程决定了细胞功能和特性。然而,绝大多数miRNA基因的分子功能仍有待确定。在这里,我们报告了miR858及其MYB83转录因子靶基因在拟南芥胞囊线虫寄生过程中转录组重编程中的协同调节功能。基因表达分析和启动子-GUS融合分析证明了miR858在诱导取食位点即合胞体中对[具体基因]的转录后调控作用。miR858的组成型过表达干扰了拟南芥的[线虫名称]寄生,导致易感性降低,而miR858丰度降低则增强了植物的易感性。同样,[具体基因]表达增加有利于线虫感染,因为不可切割编码序列的过表达显著增加了植物的易感性,而[具体基因]的突变使植物不易感。此外,RNA测序分析表明,参与激素信号通路、防御反应、芥子油苷生物合成、细胞壁修饰、糖转运和转录控制的基因是MYB83促进拟南芥线虫寄生的关键病因因素。此外,我们发现miR858介导的[具体基因]沉默通过一个反馈环受到严格调控,这可能有助于在[线虫名称]诱导的合胞体中微调超过一千个受MYB83调控的基因的表达。总之,我们的结果表明miR858-MYB83调节系统在拟南芥[线虫名称]寄生过程中精细平衡基因表达模式以确保最佳细胞功能方面发挥作用。