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高通量 RNA 测序在结直肠疾病诊断和预后中的应用。

High throughput RNA sequencing utility for diagnosis and prognosis in colon diseases.

机构信息

Mamie Gao, Allen Zhong, Neil Patel, Chiraag Alur, Dinesh Vyas, Department of Surgery, Texas Tech University, Odessa, TX 79763, United States.

出版信息

World J Gastroenterol. 2017 Apr 28;23(16):2819-2825. doi: 10.3748/wjg.v23.i16.2819.

DOI:10.3748/wjg.v23.i16.2819
PMID:28522900
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5413777/
Abstract

RNA sequencing is the use of high throughput next generation sequencing technology to survey, characterize, and quantify the transcriptome of a genome. RNA sequencing has been used to analyze the pathogenesis of several malignancies such melanoma, lung cancer, and colorectal cancer. RNA sequencing can identify differential expression of genes (DEG's), mutated genes, fusion genes, and gene isoforms in disease states. RNA sequencing has been used in the investigation of several colorectal diseases such as colorectal cancer, inflammatory bowel disease (ulcerative colitis and Crohn's disease), and irritable bowel syndrome.

摘要

RNA 测序是利用高通量下一代测序技术来检测、描述和量化基因组的转录组。RNA 测序已被用于分析多种恶性肿瘤(如黑色素瘤、肺癌和结直肠癌)的发病机制。RNA 测序可以识别疾病状态下基因的差异表达(DEG)、突变基因、融合基因和基因异构体。RNA 测序已用于研究几种结直肠疾病,如结直肠癌、炎症性肠病(溃疡性结肠炎和克罗恩病)和肠易激综合征。

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Clustered Regularly Interspaced Short Palindromic Repeats/Cas9 Genetic Engineering: Robotic Genetic Surgery.成簇规律间隔短回文重复序列/Cas9基因工程:机器人基因手术。
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Astragalus mongholicus Bunge and Curcuma aromatica Salisb. inhibits liver metastasis of colon cancer by regulating EMT via the CXCL8/CXCR2 axis and PI3K/AKT/mTOR signaling pathway.黄芪和郁金通过CXCL8/CXCR2轴及PI3K/AKT/mTOR信号通路调控上皮-间质转化,从而抑制结肠癌肝转移。
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High-throughput sequencing profile of laryngeal cancers: analysis of co-expression and competing endogenous RNA networks of circular RNAs, long non-coding RNAs, and messenger RNAs.喉癌的高通量测序图谱:环状RNA、长链非编码RNA和信使RNA的共表达及竞争性内源RNA网络分析
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Downregulation of microRNA-132 by DNA hypermethylation is associated with cell invasion in colorectal cancer.DNA高甲基化导致的微小RNA-132下调与结直肠癌的细胞侵袭相关。
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miR-143 regulates proliferation and apoptosis of colorectal cancer cells and exhibits altered expression in colorectal cancer tissue.微小RNA-143调节结肠癌细胞的增殖和凋亡,并在结直肠癌组织中呈现表达改变。
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