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通过蛋白质组学探索核糖体组成和新合成的蛋白质及其潜在的生物医学应用。

Exploring ribosome composition and newly synthesized proteins through proteomics and potential biomedical applications.

作者信息

Stastna Miroslava, Gottlieb Roberta A, Van Eyk Jennifer E

机构信息

a Heart Institute , Cedars-Sinai Medical Center , Los Angeles , CA , USA.

b Advanced Clinical BioSystems Research Institute , Cedars-Sinai Medical Center , Los Angeles , CA , USA.

出版信息

Expert Rev Proteomics. 2017 Jun;14(6):529-543. doi: 10.1080/14789450.2017.1333424. Epub 2017 May 26.

DOI:10.1080/14789450.2017.1333424
PMID:28532181
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6242274/
Abstract

Protein synthesis is the outcome of tightly regulated gene expression which is responsive to a variety of conditions. Efforts are ongoing to monitor individual stages of protein synthesis to ensure maximum efficiency and accuracy. Due to post-transcriptional regulation mechanisms, the correlation between translatome and proteome is higher than between transcriptome and proteome. However, the most accurate approach to assess the key modulators and final protein expression is directly by using proteomics. Areas covered: This review covers various proteomic strategies that were used to better understand post-transcriptional regulation, specifically during and early after translation. The methods that identify both regulatory proteins associated with translational components and newly synthesized proteins are discussed. Expert commentary: Emerging proteomic approaches make it possible to monitor protein dynamics in cells, tissues and whole animals. The ability to detect alteration in protein abundance soon after their synthesis enables earlier recognition of disease causing factors and candidates to prevent/rectify disease phenotype.

摘要

蛋白质合成是受到严格调控的基因表达的结果,该过程对多种条件都有响应。目前正在努力监测蛋白质合成的各个阶段,以确保最高效率和准确性。由于存在转录后调控机制,翻译组与蛋白质组之间的相关性高于转录组与蛋白质组之间的相关性。然而,评估关键调节因子和最终蛋白质表达的最准确方法是直接使用蛋白质组学。涵盖领域:本综述涵盖了各种蛋白质组学策略,这些策略用于更好地理解转录后调控,特别是在翻译过程中及翻译后早期。文中讨论了鉴定与翻译组件相关的调节蛋白和新合成蛋白的方法。专家评论:新兴的蛋白质组学方法使监测细胞、组织和整个动物中的蛋白质动态成为可能。在蛋白质合成后不久就能检测到其丰度变化的能力,有助于更早地识别致病因素以及预防/纠正疾病表型的候选因素。

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Role of microRNAs in cardiac development and disease.微小RNA在心脏发育和疾病中的作用。
Exp Ther Med. 2017 Jan;13(1):3-8. doi: 10.3892/etm.2016.3932. Epub 2016 Nov 28.
3
The seven faces of SIRT7.SIRT7的七个方面。
Transcription. 2017 Mar 15;8(2):67-74. doi: 10.1080/21541264.2016.1276658. Epub 2017 Jan 9.
4
A SILAC-Based Method for Quantitative Proteomic Analysis of Intestinal Organoids.基于 SILAC 的肠道类器官定量蛋白质组学分析方法。
Sci Rep. 2016 Nov 30;6:38195. doi: 10.1038/srep38195.
5
Using N-Metabolic Labeling for Quantitative Proteomic Analyses.使用N-代谢标记进行定量蛋白质组学分析。
Methods Mol Biol. 2017;1546:235-243. doi: 10.1007/978-1-4939-6730-8_20.
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Hold on to your friends: Dedicated chaperones of ribosomal proteins: Dedicated chaperones mediate the safe transfer of ribosomal proteins to their site of pre-ribosome incorporation.与你的朋友们保持联系:核糖体蛋白的专属伴侣蛋白:专属伴侣蛋白介导核糖体蛋白安全转移至其在核糖体前体中的掺入位点。
Bioessays. 2017 Jan;39(1):1-12. doi: 10.1002/bies.201600153. Epub 2016 Nov 17.
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