• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

锌指蛋白ZC3H32在布氏锥虫血流形式中的作用。

The role of the zinc finger protein ZC3H32 in bloodstream-form Trypanosoma brucei.

作者信息

Klein Cornelia, Terrao Monica, Clayton Christine

机构信息

Centre for Molecular Biology of Heidelberg University, DKFZ-ZMBH Alliance, Heidelberg, Germany.

出版信息

PLoS One. 2017 May 17;12(5):e0177901. doi: 10.1371/journal.pone.0177901. eCollection 2017.

DOI:10.1371/journal.pone.0177901
PMID:28545140
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5435347/
Abstract

Kinetoplastids rely heavily on post-transcriptional mechanisms for control of gene expression, with regulation of mRNA processing, translation and degradation by RNA-binding proteins. ZC3H32 is a cytosolic mRNA-binding protein with three non-canonical CCCH zinc finger domains. It is much more abundant in bloodstream-form Trypanosoma brucei than in procyclic forms. Tethering of ZC3H32 to a reporter mRNA suppressed translation and resulted in mRNA degradation, and deletion analysis suggested that this activity was present in both the N- and C-terminal domains, but not the central zinc finger-containing domain. Tandem affinity purification, however, revealed no interaction partners that might account for this activity. RNASeq analyses did not yield any evidence for sequence-specific binding or regulation of specific mRNAs. The presence of ZC3H32 homologues in monogenetic and free-living Euglenids also argues against a role in developmental regulation, although its function may have diverged in evolution. T. brucei ZC3H32 might be implicated in basal mRNA metabolism, with this role perhaps being taken over by another protein in procyclic forms.

摘要

动质体在很大程度上依赖转录后机制来控制基因表达,通过RNA结合蛋白对mRNA加工、翻译和降解进行调控。ZC3H32是一种具有三个非典型CCCH锌指结构域的胞质mRNA结合蛋白。它在布氏锥虫的血流形式中比在原循环形式中丰富得多。将ZC3H32与报告mRNA拴系会抑制翻译并导致mRNA降解,缺失分析表明这种活性存在于N端和C端结构域,但不存在于含中央锌指的结构域。然而,串联亲和纯化未发现可能解释这种活性的相互作用伙伴。RNA测序分析未产生任何序列特异性结合或特定mRNA调控的证据。单基因和自由生活的眼虫中存在ZC3H32同源物,这也反驳了其在发育调控中的作用,尽管其功能在进化过程中可能已经发生了分化。布氏锥虫ZC3H32可能参与基础mRNA代谢,在原循环形式中这一作用可能由另一种蛋白质承担。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/e4dc5c905a97/pone.0177901.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/f5a504949f69/pone.0177901.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/76f9a88d1e47/pone.0177901.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/2dac70d31db2/pone.0177901.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/b9dc069042f5/pone.0177901.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/c27224bb4700/pone.0177901.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/2bbf578fd45f/pone.0177901.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/9c1137b3f0d2/pone.0177901.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/e4dc5c905a97/pone.0177901.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/f5a504949f69/pone.0177901.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/76f9a88d1e47/pone.0177901.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/2dac70d31db2/pone.0177901.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/b9dc069042f5/pone.0177901.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/c27224bb4700/pone.0177901.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/2bbf578fd45f/pone.0177901.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/9c1137b3f0d2/pone.0177901.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc01/5435347/e4dc5c905a97/pone.0177901.g008.jpg

相似文献

1
The role of the zinc finger protein ZC3H32 in bloodstream-form Trypanosoma brucei.锌指蛋白ZC3H32在布氏锥虫血流形式中的作用。
PLoS One. 2017 May 17;12(5):e0177901. doi: 10.1371/journal.pone.0177901. eCollection 2017.
2
The Trypanosoma brucei CCCH zinc finger proteins ZC3H12 and ZC3H13.布氏锥虫CCCH型锌指蛋白ZC3H12和ZC3H13
Mol Biochem Parasitol. 2012 Jun;183(2):184-8. doi: 10.1016/j.molbiopara.2012.02.006. Epub 2012 Feb 17.
3
Post-transcriptional regulation of the trypanosome heat shock response by a zinc finger protein.锌指蛋白对锥虫热休克反应的转录后调控。
PLoS Pathog. 2013;9(4):e1003286. doi: 10.1371/journal.ppat.1003286. Epub 2013 Apr 4.
4
Roles of the Pumilio domain protein PUF3 in growth and differentiation.PUF3 结构域蛋白在生长和分化中的作用。
Parasitology. 2020 Sep;147(11):1171-1183. doi: 10.1017/S003118202000092X. Epub 2020 Jun 9.
5
The Trypanosoma brucei zinc finger protein ZC3H18 is involved in differentiation.布氏锥虫锌指蛋白ZC3H18参与分化过程。
Mol Biochem Parasitol. 2011 Jun;177(2):148-51. doi: 10.1016/j.molbiopara.2011.02.007. Epub 2011 Feb 24.
6
Expression of the RNA recognition motif protein RBP10 promotes a bloodstream-form transcript pattern in Trypanosoma brucei.RNA 识别基序蛋白 RBP10 的表达促进了布氏锥虫血腔期转录模式。
Mol Microbiol. 2012 Mar;83(5):1048-63. doi: 10.1111/j.1365-2958.2012.07988.x. Epub 2012 Feb 15.
7
tbCPSF30 depletion by RNA interference disrupts polycistronic RNA processing in Trypanosoma brucei.通过RNA干扰使锥虫中的tbCPSF30缺失会破坏多顺反子RNA的加工过程。
J Biol Chem. 2003 Jul 18;278(29):26870-8. doi: 10.1074/jbc.M302405200. Epub 2003 May 13.
8
Protein stability regulates the expression of cytochrome c during the developmental cycle of Trypanosoma brucei.蛋白质稳定性在布氏锥虫发育周期中调节细胞色素c的表达。
Mol Biochem Parasitol. 1993 Feb;57(2):305-15. doi: 10.1016/0166-6851(93)90206-d.
9
Interactions of the zinc-finger-domain protein ZC3H28.锌指结构域蛋白 ZC3H28 的相互作用。
Parasitology. 2022 Mar;149(3):356-370. doi: 10.1017/S003118202100189X. Epub 2021 Nov 2.
10
Regulating a Post-Transcriptional Regulator: Protein Phosphorylation, Degradation and Translational Blockage in Control of the Trypanosome Stress-Response RNA-Binding Protein ZC3H11.调控一种转录后调节因子:锥虫应激反应RNA结合蛋白ZC3H11调控中的蛋白质磷酸化、降解及翻译阻断
PLoS Pathog. 2016 Mar 22;12(3):e1005514. doi: 10.1371/journal.ppat.1005514. eCollection 2016 Mar.

引用本文的文献

1
Life stage-specific poly(A) site selection regulated by DRBD18.DRBD18 调控的生命阶段特异性 poly(A) 位点选择
Proc Natl Acad Sci U S A. 2024 Jul 16;121(29):e2403188121. doi: 10.1073/pnas.2403188121. Epub 2024 Jul 11.
2
Translational control by DRBD18 contributes to the maintenance of the procyclic state.DRBD18 通过翻译控制有助于维持前鞭毛体状态。
RNA. 2023 Dec;29(12):1881-1895. doi: 10.1261/rna.079625.123. Epub 2023 Sep 20.
3
Interactions of the zinc-finger-domain protein ZC3H28.锌指结构域蛋白 ZC3H28 的相互作用。

本文引用的文献

1
Translation Regulation and RNA Granule Formation after Heat Shock of Procyclic Form Trypanosoma brucei: Many Heat-Induced mRNAs Are also Increased during Differentiation to Mammalian-Infective Forms.布氏锥虫前循环型热休克后的翻译调控与RNA颗粒形成:许多热诱导的mRNA在向哺乳动物感染型分化过程中也会增加。
PLoS Negl Trop Dis. 2016 Sep 8;10(9):e0004982. doi: 10.1371/journal.pntd.0004982. eCollection 2016 Sep.
2
Gene expression in Kinetoplastids.动质体中的基因表达。
Curr Opin Microbiol. 2016 Aug;32:46-51. doi: 10.1016/j.mib.2016.04.018. Epub 2016 May 10.
3
Integrative analysis of the Trypanosoma brucei gene expression cascade predicts differential regulation of mRNA processing and unusual control of ribosomal protein expression.
Parasitology. 2022 Mar;149(3):356-370. doi: 10.1017/S003118202100189X. Epub 2021 Nov 2.
4
Proteomics Uncovers Novel Components of an Interactive Protein Network Supporting RNA Export in Trypanosomes.蛋白质组学揭示了支持原生动物 RNA 输出的交互式蛋白质网络的新组成部分。
Mol Cell Proteomics. 2022 Mar;21(3):100208. doi: 10.1016/j.mcpro.2022.100208. Epub 2022 Jan 26.
5
Functional insights from a surface antigen mRNA-bound proteome.基于表面抗原 mRNA 结合蛋白组的功能研究
Elife. 2021 Mar 30;10:e68136. doi: 10.7554/eLife.68136.
6
Insights into the functions and RNA binding of ZC3H22, RBP9 and DRBD7.深入了解 ZC3H22、RBP9 和 DRBD7 的功能和 RNA 结合。
Parasitology. 2021 Sep;148(10):1186-1195. doi: 10.1017/S0031182021000123. Epub 2021 Feb 4.
7
The ASCT/SCS cycle fuels mitochondrial ATP and acetate production in Trypanosoma brucei.ASCT/SCS 循环为布氏锥虫的线粒体 ATP 和醋酸盐生成提供燃料。
Biochim Biophys Acta Bioenerg. 2020 Nov 1;1861(11):148283. doi: 10.1016/j.bbabio.2020.148283. Epub 2020 Aug 4.
8
The RNA-associated proteins MKT1 and MKT1L form alternative PBP1-containing complexes in .RNA 相关蛋白 MKT1 和 MKT1L 在. 中形成替代的含有 PBP1 的复合物。
J Biol Chem. 2020 Aug 7;295(32):10940-10955. doi: 10.1074/jbc.RA120.013306. Epub 2020 Jun 12.
9
Roles of the Pumilio domain protein PUF3 in growth and differentiation.PUF3 结构域蛋白在生长和分化中的作用。
Parasitology. 2020 Sep;147(11):1171-1183. doi: 10.1017/S003118202000092X. Epub 2020 Jun 9.
10
Regulation of gene expression in trypanosomatids: living with polycistronic transcription.原核生物和真核生物中转录调控的比较
Open Biol. 2019 Jun 28;9(6):190072. doi: 10.1098/rsob.190072. Epub 2019 Jun 5.
布氏锥虫基因表达级联的综合分析预测了mRNA加工的差异调控和核糖体蛋白表达的异常控制。
BMC Genomics. 2016 Apr 26;17:306. doi: 10.1186/s12864-016-2624-3.
4
Transcriptome Remodeling in Trypanosoma cruzi and Human Cells during Intracellular Infection.克氏锥虫与人类细胞在细胞内感染过程中的转录组重塑
PLoS Pathog. 2016 Apr 5;12(4):e1005511. doi: 10.1371/journal.ppat.1005511. eCollection 2016 Apr.
5
Quantitative Proteomics Uncovers Novel Factors Involved in Developmental Differentiation of Trypanosoma brucei.定量蛋白质组学揭示了布氏锥虫发育分化过程中涉及的新因子。
PLoS Pathog. 2016 Feb 24;12(2):e1005439. doi: 10.1371/journal.ppat.1005439. eCollection 2016 Feb.
6
Gene expression regulatory networks in Trypanosoma brucei: insights into the role of the mRNA-binding proteome.布氏锥虫中的基因表达调控网络:对mRNA结合蛋白质组作用的见解
Mol Microbiol. 2016 May;100(3):457-71. doi: 10.1111/mmi.13328. Epub 2016 Mar 10.
7
Comparative Life Cycle Transcriptomics Revises Leishmania mexicana Genome Annotation and Links a Chromosome Duplication with Parasitism of Vertebrates.比较生命周期转录组学修正墨西哥利什曼原虫基因组注释并将染色体复制与脊椎动物寄生联系起来。
PLoS Pathog. 2015 Oct 9;11(10):e1005186. doi: 10.1371/journal.ppat.1005186. eCollection 2015 Oct.
8
Arginine methylation of DRBD18 differentially impacts its opposing effects on the trypanosome transcriptome.DRBD18的精氨酸甲基化对锥虫转录组的相反作用有不同影响。
Nucleic Acids Res. 2015 Jun 23;43(11):5501-23. doi: 10.1093/nar/gkv428. Epub 2015 May 4.
9
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.使用DESeq2对RNA测序数据的倍数变化和离散度进行适度估计。
Genome Biol. 2014;15(12):550. doi: 10.1186/s13059-014-0550-8.
10
Transcriptome-wide analysis of trypanosome mRNA decay reveals complex degradation kinetics and suggests a role for co-transcriptional degradation in determining mRNA levels.锥虫mRNA衰变的全转录组分析揭示了复杂的降解动力学,并表明共转录降解在决定mRNA水平中起作用。
Mol Microbiol. 2014 Oct;94(2):307-26. doi: 10.1111/mmi.12764. Epub 2014 Sep 15.