• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

开发用于典型农产品遗传鉴定的古老地方品种分子鉴定分析方法:以大麦“阿戈尔迪诺”为例

Developing a Molecular Identification Assay of Old Landraces for the Genetic Authentication of Typical Agro-Food Products: The Case Study of the Barley 'Agordino'.

作者信息

Palumbo Fabio, Galla Giulio, Barcaccia Gianni

机构信息

University of Padova, Department of Agronomy, Food, Natural Resources, Animals and Environment, Viale dell'Università 16, IT-35020 Legnaro (Padova), Italy.

出版信息

Food Technol Biotechnol. 2017 Mar;55(1):29-39. doi: 10.17113/ftb.55.01.17.4858.

DOI:10.17113/ftb.55.01.17.4858
PMID:28559731
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5434372/
Abstract

The orzo Agordino is a very old local variety of domesticated barley ( ssp. L.) that is native to the Agordo District, Province of Belluno, and is widespread in the Veneto Region, Italy. Seeds of this landrace are widely used for the preparation of very famous dishes of the dolomitic culinary tradition such as barley soup, bakery products and local beer. Understanding the genetic diversity and identity of the Agordino barley landrace is a key step to establish conservation and valorisation strategies of this local variety and also to provide molecular traceability tools useful to ascertain the authenticity of its derivatives. The gene pool of the Agordino barley landrace was reconstructed using 60 phenotypically representative individual plants and its genotypic relationships with commercial varieties were investigated using 21 pure lines widely cultivated in the Veneto Region. For genomic DNA analysis, following an initial screening of 14 mapped microsatellite (SSR) loci, seven discriminant markers were selected on the basis of their genomic position across linkage groups and polymorphic marker alleles per locus. The genetic identity of the local barley landrace was determined by analysing all SSR markers in a single multi-locus PCR assay. Extent of genotypic variation within the Agordino barley landrace and the genotypic differentiation between the landrace individuals and the commercial varieties was determined. Then, as few as four highly informative SSR loci were selected and used to develop a molecular traceability system exploitable to verify the genetic authenticity of food products deriving from the Agordino landrace. This genetic authentication assay was validated using both DNA pools from individual Agordino barley plants and DNA samples from Agordino barley food products. On the whole, our data support the usefulness and robustness of this DNA-based diagnostic tool for the orzo Agordino identification, which could be rapidly and efficiently exploited to guarantee the authenticity of local varieties and the typicality of food products.

摘要

奥尔佐·阿戈尔迪诺(Orzo Agordino)是一种非常古老的本地驯化大麦品种(亚种L.),原产于贝卢诺省的阿戈尔迪诺地区,广泛分布于意大利威尼托大区。这种地方品种的种子被广泛用于制作多洛米蒂烹饪传统中非常著名的菜肴,如大麦汤、烘焙食品和当地啤酒。了解阿戈尔迪诺大麦地方品种的遗传多样性和特性是制定该地方品种保护和增值策略的关键一步,也是提供有助于确定其衍生物真实性的分子溯源工具的关键一步。利用60株表型代表性单株重建了阿戈尔迪诺大麦地方品种的基因库,并利用威尼托大区广泛种植的21个纯系研究了其与商业品种的基因型关系。对于基因组DNA分析,在初步筛选14个定位微卫星(SSR)位点后,根据它们在连锁群中的基因组位置和每个位点的多态性标记等位基因,选择了7个判别标记。通过在单一多位点PCR分析中分析所有SSR标记来确定当地大麦地方品种的遗传特性。确定了阿戈尔迪诺大麦地方品种内的基因型变异程度以及地方品种个体与商业品种之间的基因型分化。然后,选择了少至4个信息丰富的SSR位点,并用于开发一种分子溯源系统,可用于验证源自阿戈尔迪诺地方品种的食品的遗传真实性。使用来自阿戈尔迪诺大麦单株的DNA池和来自阿戈尔迪诺大麦食品的DNA样本对这种基因鉴定分析进行了验证。总体而言,我们的数据支持这种基于DNA的诊断工具用于奥尔佐·阿戈尔迪诺鉴定的有用性和稳健性,该工具可快速有效地用于保证地方品种的真实性和食品的典型性。

相似文献

1
Developing a Molecular Identification Assay of Old Landraces for the Genetic Authentication of Typical Agro-Food Products: The Case Study of the Barley 'Agordino'.开发用于典型农产品遗传鉴定的古老地方品种分子鉴定分析方法:以大麦“阿戈尔迪诺”为例
Food Technol Biotechnol. 2017 Mar;55(1):29-39. doi: 10.17113/ftb.55.01.17.4858.
2
Population structure of barley landrace populations and gene-flow with modern varieties.大麦地方品种群体的种群结构及与现代品种的基因流。
PLoS One. 2013 Dec 27;8(12):e83891. doi: 10.1371/journal.pone.0083891. eCollection 2013.
3
Conservation and genetic characterisation of common bean landraces from Cilento region (southern Italy): high differentiation in spite of low genetic diversity.意大利南部奇伦托地区普通菜豆地方品种的保护与遗传特征分析:尽管遗传多样性较低,但分化程度较高。
Genetica. 2018 Feb;146(1):29-44. doi: 10.1007/s10709-017-9994-6. Epub 2017 Oct 13.
4
Ethnobotany, diverse food uses, claimed health benefits and implications on conservation of barley landraces in North Eastern Ethiopia highlands.埃塞俄比亚东北部高地的民族植物学、多样化的食物用途、声称的健康益处以及对大麦地方品种保护的影响。
J Ethnobiol Ethnomed. 2011 Jun 28;7:19. doi: 10.1186/1746-4269-7-19.
5
Genetic structure and linkage disequilibrium in landrace populations of barley in Sardinia.撒丁岛地方大麦群体的遗传结构和连锁不平衡。
Theor Appl Genet. 2012 Jun;125(1):171-84. doi: 10.1007/s00122-012-1824-8. Epub 2012 Mar 13.
6
Comparative analysis of genetic diversity between Qinghai-Tibetan wild and Chinese landrace barley.青藏高原野生大麦与中国地方品种大麦遗传多样性的比较分析。
Genome. 2009 Oct;52(10):849-61. doi: 10.1139/g09-058.
7
Introgression from modern hybrid varieties into landrace populations of maize (Zea mays ssp. mays L.) in central Italy.现代杂交品种基因渗入意大利中部玉米(Zea mays ssp. mays L.)地方品种群体的情况。
Mol Ecol. 2009 Feb;18(4):603-21. doi: 10.1111/j.1365-294X.2008.04064.x.
8
Adaptation and diversity along an altitudinal gradient in Ethiopian barley (Hordeum vulgare L.) landraces revealed by molecular analysis.利用分子分析揭示埃塞俄比亚大麦(Hordeum vulgare L.)地方品种沿海拔梯度的适应性和多样性。
BMC Plant Biol. 2010 Jun 21;10:121. doi: 10.1186/1471-2229-10-121.
9
Chloroplast DNA Diversity of Tunisian Barley Landraces as Revealed by cpSSRs Molecular Markers and Implication for Conservation Strategies.基于 cpSSR 分子标记揭示的突尼斯大麦地方品种的叶绿体 DNA 多样性及其对保护策略的启示。
Genet Res (Camb). 2022 Sep 26;2022:3905957. doi: 10.1155/2022/3905957. eCollection 2022.
10
Genetic diversity analysis of Tibetan wild barley using SSR markers.利用SSR标记对西藏野生大麦进行遗传多样性分析。
Yi Chuan Xue Bao. 2006 Oct;33(10):917-28. doi: 10.1016/S0379-4172(06)60126-1.

引用本文的文献

1
Reappraisal of the Genetic Diversity Patterns in -The Queen of the Andes: Insights from Molecular Marker Analysis Reveal an Inbreeding Reproductive Strategy.对安第斯女王的遗传多样性模式的重新评估:分子标记分析的见解揭示了一种近亲繁殖的生殖策略。
Plants (Basel). 2025 Jan 22;14(3):321. doi: 10.3390/plants14030321.
2
Deciphering the genetic diversity and population structure of wild barley germplasm against corn leaf aphid, Rhopalosiphum maidis (Fitch).解析抗玉米叶蝉野生大麦种质的遗传多样性和种群结构。
Sci Rep. 2023 Oct 12;13(1):17313. doi: 10.1038/s41598-023-42717-7.
3
Deciphering the core seed endo-bacteriome of the highland barley in Tibet plateau.解析青藏高原青稞核心种子内生菌群落
Front Plant Sci. 2022 Oct 28;13:1041504. doi: 10.3389/fpls.2022.1041504. eCollection 2022.
4
Developing and Testing Molecular Markers in (Hemp) for Their Use in Variety and Dioecy Assessments.开发并测试用于大麻品种和雌雄异株评估的分子标记
Plants (Basel). 2021 Oct 14;10(10):2174. doi: 10.3390/plants10102174.
5
Molecular Hallmarks, Agronomic Performances and Seed Nutraceutical Properties to Exploit Neglected Genetic Resources of Common Beans Grown by Organic Farming in Two Contrasting Environments.分子特征、农艺性能及种子营养特性,以发掘两种不同环境下有机种植的普通菜豆被忽视的遗传资源
Front Plant Sci. 2021 May 25;12:674985. doi: 10.3389/fpls.2021.674985. eCollection 2021.
6
The influence of breeding history, origin and growth type on population structure of barley as revealed by SSR markers.SSR 标记揭示的繁殖历史、起源和生长类型对大麦群体结构的影响。
Sci Rep. 2020 Nov 5;10(1):19165. doi: 10.1038/s41598-020-75339-4.
7
Diversity Analysis of Sweet Potato Genetic Resources Using Morphological and Qualitative Traits and Molecular Markers.利用形态学和定性特征及分子标记对甘薯遗传资源的多样性进行分析。
Genes (Basel). 2019 Oct 24;10(11):840. doi: 10.3390/genes10110840.

本文引用的文献

1
Population structure of barley landrace populations and gene-flow with modern varieties.大麦地方品种群体的种群结构及与现代品种的基因流。
PLoS One. 2013 Dec 27;8(12):e83891. doi: 10.1371/journal.pone.0083891. eCollection 2013.
2
PICcalc: an online program to calculate polymorphic information content for molecular genetic studies.PICcalc:一个用于分子遗传学研究中计算多态信息含量的在线程序。
Biochem Genet. 2012 Oct;50(9-10):670-2. doi: 10.1007/s10528-012-9509-1. Epub 2012 May 10.
3
Genetic diversity analysis of barley landraces and cultivars in the Shanghai region of China.中国上海地区大麦地方品种和栽培品种的遗传多样性分析
Genet Mol Res. 2012 Mar 16;11(1):644-50. doi: 10.4238/2012.March.16.2.
4
A high density barley microsatellite consensus map with 775 SSR loci.一张包含775个简单序列重复(SSR)位点的高密度大麦微卫星整合图谱。
Theor Appl Genet. 2007 Apr;114(6):1091-103. doi: 10.1007/s00122-007-0503-7. Epub 2007 Mar 8.
5
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.使用STRUCTURE软件检测个体聚类数量:一项模拟研究
Mol Ecol. 2005 Jul;14(8):2611-20. doi: 10.1111/j.1365-294X.2005.02553.x.
6
THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.有限种群中能够维持的等位基因数量。
Genetics. 1964 Apr;49(4):725-38. doi: 10.1093/genetics/49.4.725.
7
Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.利用多位点基因型数据推断群体结构:连锁位点与相关等位基因频率
Genetics. 2003 Aug;164(4):1567-87. doi: 10.1093/genetics/164.4.1567.
8
Inference of population structure using multilocus genotype data.利用多位点基因型数据推断群体结构。
Genetics. 2000 Jun;155(2):945-59. doi: 10.1093/genetics/155.2.945.
9
An economic method for the fluorescent labeling of PCR fragments.一种用于PCR片段荧光标记的经济方法。
Nat Biotechnol. 2000 Feb;18(2):233-4. doi: 10.1038/72708.
10
Analysis of gene diversity in subdivided populations.细分群体中的基因多样性分析。
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3321-3. doi: 10.1073/pnas.70.12.3321.