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全基因组测序在一例累及双心室的家族性致心律失常性心肌病中鉴定出DSG2基因的一种罕见纯合致病突变。

Whole Genome Sequence Identified a Rare Homozygous Pathogenic Mutation of the DSG2 Gene in a Familial Arrhythmogenic Cardiomyopathy Involving Both Ventricles.

作者信息

Lin Yubi, Zhang Qianhuan, Zhong Zhi An, Xu Zhe, He Siqi, Rao Fang, Liu Yang, Tang Jiaojiao, Wang Feng, Liu Hui, Xie Jiajun, Wu Hongmei, Wang Shuxia, Li Xin, Shan Zhixin, Deng Chunyu, Liao Zili, Deng Hai, Liao Hongtao, Xue Yumei, Chen Wanqun, Zhan Xianzhang, Zhang Bin, Wu Shulin

机构信息

Guangdong Cardiovascular Institute, Guangdong Academy of Medical Sciences, Guangdong General Hospital, Guangdong Provincial Key Laboratory of Clinical Pharmacology, Medical School of South China University of Technology, Guangzhou, China.

出版信息

Cardiology. 2017;138(1):41-54. doi: 10.1159/000462962. Epub 2017 Jun 3.

Abstract

BACKGROUND

This study was designed to identify the pathogenic mutation in a Chinese family with arrhythmogenic right ventricular cardiomyopathy/dysplasia (ARVC/D) using whole genome sequencing (WGS).

METHODS AND RESULTS

Probands II:1 and II:2 underwent routine examinations for diagnosis. Genomic DNA was extracted from the peripheral blood of family members and analyzed using WGS. A total of 60,285 single-nucleotide polymorphisms (SNP) and 13,918 insertions/deletions (InDel) occurring in the exonic regions of genes and predisposing to cardiomyopathies and arrhythmias were identified. When filtered using the 1000 Genomes Project (2014 version), NHLBI ESP6500, and ExAC databases, 12 missense SNP and 2 InDel in exonic regions remained, the allele frequencies of which were <0.01 or unknown. The potentially pathogenic mutations that occurred in the genes DSG2, PKP4, PRKAG2, FOXD4, CTTN, and DMD, which were identified by SIFT or PolyPhen-2 software as "damaging," were validated using Sanger sequencing. Probands II:1 and II:2 shared an extremely rare homozygous mutation in the DSG2 (p.F531C) gene, which was also demonstrated using intersection analysis of WGS data from probands II:1 and II:2. Electron microscopy and histological staining of myocardial biopsies showed widened and destroyed intercalated discs, and interrupted, atrophic, and disarranged myocardial fibers, and hyperplastic interstitial fibers, collagen fibers, and adipocytes were infiltrated and invaded.

CONCLUSIONS

A homozygous mutation of DSG2 p.F531C was identified as the pathogenic mutation in patients with ARVC/D involving both ventricles, as a result of widened and impaired intercalated discs, interrupted myocardial fibers, and abnormally hyperplastic interstitial fibers, collagen fibers, and adipocytes.

摘要

背景

本研究旨在通过全基因组测序(WGS)确定一个患有致心律失常性右室心肌病/发育不良(ARVC/D)的中国家系中的致病突变。

方法与结果

先证者II:1和II:2接受了诊断的常规检查。从家庭成员外周血中提取基因组DNA,并使用WGS进行分析。共鉴定出60,285个单核苷酸多态性(SNP)和13,918个插入/缺失(InDel),这些位于基因外显子区域,且易导致心肌病和心律失常。使用千人基因组计划(2014版)、美国国立心肺血液研究所外显子组测序计划(NHLBI ESP6500)和外显子整合数据库(ExAC)进行筛选后,外显子区域仍有12个错义SNP和2个InDel,其等位基因频率<0.01或未知。通过SIFT或PolyPhen-2软件鉴定为“有害”的DSG2、PKP4、PRKAG2、FOXD4、CTTN和DMD基因中的潜在致病突变,使用桑格测序法进行验证。先证者II:1和II:2在DSG2(p.F531C)基因中共享一个极其罕见的纯合突变,这也通过对先证者II:1和II:2的WGS数据进行交叉分析得到证实。心肌活检的电子显微镜检查和组织学染色显示闰盘增宽和破坏,心肌纤维中断、萎缩和排列紊乱,间质纤维、胶原纤维和脂肪细胞增生并浸润。

结论

DSG2 p.F531C的纯合突变被确定为累及双心室的ARVC/D患者的致病突变,其原因是闰盘增宽和受损、心肌纤维中断以及间质纤维、胶原纤维和脂肪细胞异常增生。

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