Ince Semra, Kutsch Miriam, Shydlovskyi Sergii, Herrmann Christian
Physical Chemistry I, Ruhr-University Bochum, Germany.
FEBS J. 2017 Jul;284(14):2284-2301. doi: 10.1111/febs.14126. Epub 2017 Jun 22.
Belonging to the dynamin superfamily of large GTPases, human guanylate-binding proteins (hGBPs) comprise a family of seven isoforms (hGBP-1 to hGBP-7) that are strongly upregulated in response to interferon-γ and other cytokines. Accordingly, several hGBPs are found to exhibit various cellular functions encompassing inhibitory effects on cell proliferation, tumor suppression as well as antiviral and antibacterial activity; however, their mechanism of action is only poorly understood. Often, cellular functions of dynamin-related proteins are closely linked to their ability to form nucleotide-dependent oligomers, a feature that also applies to hGBP-1 and hGBP-5. hGBPs are described as monomers, dimers, tetramers, and higher oligomeric species, the function of which is not clearly established. Therefore, this work focused on the oligomerization capability of hGBP-1 and hGBP-5, which are reported to assemble to homodimers and homotetramers. Employing independent methods such as size-exclusion chromatography, which relies on the hydrodynamic radius, and multiangle light scattering, which relies on the mass of the protein, revealed that previous interpretations regarding the size of the proteins and their complexes have to be revised. Additional studies using inter- and intramolecular Förster resonance energy transfer demonstrated that nucleotide-triggered intramolecular structural changes lead to a more extended shape of hGBP-1 being responsible for the appearance of larger oligomeric species. Thus, previously reported tetrameric and dimeric species of hGBP-1 and hGBP-5 were unmasked as dimers and monomers, respectively, with their shapes depending on both the bound nucleotide and the ionic strength of the solution.
人鸟苷酸结合蛋白(hGBPs)属于大型GTP酶的发动蛋白超家族,由七个亚型(hGBP-1至hGBP-7)组成,它们在受到干扰素-γ和其他细胞因子刺激后会强烈上调。因此,人们发现几种hGBPs具有多种细胞功能,包括对细胞增殖的抑制作用、肿瘤抑制以及抗病毒和抗菌活性;然而,它们的作用机制却知之甚少。通常,发动蛋白相关蛋白的细胞功能与其形成核苷酸依赖性寡聚体的能力密切相关,这一特性也适用于hGBP-1和hGBP-5。hGBPs被描述为单体、二聚体、四聚体和更高阶的寡聚体形式,其功能尚未明确。因此,这项工作聚焦于hGBP-1和hGBP-5的寡聚化能力,据报道它们可组装成同型二聚体和同型四聚体。采用诸如依赖流体动力学半径的尺寸排阻色谱法和依赖蛋白质质量的多角度光散射等独立方法,结果表明先前关于蛋白质及其复合物大小的解释必须修正。使用分子间和分子内Förster共振能量转移的进一步研究表明,核苷酸触发的分子内结构变化导致hGBP-1呈现出更伸展的形状,这是形成更大寡聚体形式的原因。因此,先前报道的hGBP-1和hGBP-5的四聚体和二聚体形式分别被揭示为二聚体和单体,其形状取决于结合的核苷酸和溶液的离子强度。