Laboratory for Conservation of Endangered Species (LaCONES), CSIR-Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad, 500007, India.
Antonie Van Leeuwenhoek. 2017 Sep;110(9):1227-1241. doi: 10.1007/s10482-017-0896-5. Epub 2017 Jun 13.
Phylogenetic analyses were performed for members of the family Chromatiaceae, signature nucleotides deduced and the genus Alishewanella transferred to Chromatiaceae. Phylogenetic analyses were executed for the genera Alishewanella, Arsukibacterium and Rheinheimera and the genus Rheinheimera is proposed to be split, with the creation of the Pararheinheimera gen. nov. Furthermore, the species Rheinheimera longhuensis, is transferred to the genus Alishewanella as Alishewanella longhuensis comb. nov. Besides, the genera Alishewanella and Rheinheimera are also emended. Strain LNK-7.1 was isolated from a water sample from the Lonar Lake, India. Cells were Gram-negative, motile rods, positive for catalase, oxidase, phosphatase, contained C, Cω8c, summed feature3 (Cω6c and/or Cω7c) and summed feature 8 (Cω7c) as major fatty acids, PE and PG as the major lipids and Q-8 as the sole respiratory quinone. Phylogenetic analyses using NJ, ME, ML and Maximum parsimony, based on 16S rRNA gene sequences, identified Alishewanella tabrizica RCRI4 as the closely related species of strain LNK-7.1 with a 16S rRNA gene sequence similarity of 98.13%. The DNA-DNA similarity between LNK-7.1 and the closely related species (A. tabrizica) was only 12.0% and, therefore, strain LNK-7.1 was identified as a novel species of the genus Alishewanella with the proposed name Alishewanella alkalitolerans sp. nov. In addition phenotypic characteristics confirmed the species status to strain LNK-7.1. The type strain of A. alkalitolerans is LNK-7.1 (LMG 29592 = KCTC 52279), isolated from a water sample collected from the Lonar lake, India.
对 Chromatiaceae 科的成员进行了系统发育分析,推断了特征核苷酸,并将 Alishewanella 属转移到 Chromatiaceae 科。对 Alishewanella、Arsukibacterium 和 Rheinheimera 属进行了系统发育分析,并建议将 Rheinheimera 属分为两个属,创建了 Pararheinheimera gen. nov. 此外,将 Rheinheimera longhuensis 种转移到 Alishewanella 属,作为 Alishewanella longhuensis comb. nov. 除此之外,还对 Alishewanella 和 Rheinheimera 两个属进行了修正。菌株 LNK-7.1 是从印度 Lonar 湖的水样中分离出来的。细胞呈革兰氏阴性、运动棒状,过氧化氢酶、氧化酶、磷酸酶阳性,含有 C、Cω8c、特征 3(Cω6c 和/或 Cω7c)和特征 8(Cω7c)作为主要脂肪酸,PE 和 PG 作为主要脂质,Q-8 作为唯一的呼吸醌。基于 16S rRNA 基因序列的 NJ、ME、ML 和最大简约法的系统发育分析,确定 Alishewanella tabrizica RCRI4 是与 LNK-7.1 密切相关的物种,16S rRNA 基因序列相似度为 98.13%。LNK-7.1 与密切相关的物种(A. tabrizica)之间的 DNA-DNA 相似度仅为 12.0%,因此,LNK-7.1 被鉴定为 Alishewanella 属的一个新种,命名为 Alishewanella alkalitolerans sp. nov. 此外,表型特征也证实了 LNK-7.1 菌株的种属地位。A. alkalitolerans 的模式菌株是 LNK-7.1(LMG 29592 = KCTC 52279),从印度 Lonar 湖的水样中分离得到。