Yu Wenjun, Wang Rongshui, Huang Haiyan, Xie Huijun, Wang Shuning
State Key Laboratory of Microbial Technology, School of Life Science, Shandong University, Jinan, People's Republic of China.
Institute of Basic Medicine, Shandong Academy of Medical Science, Jinan, People's Republic of China.
Appl Environ Microbiol. 2017 Aug 17;83(17). doi: 10.1128/AEM.01050-17. Print 2017 Sep 1.
S33 can grow with nicotine as the sole source of carbon, nitrogen, and energy via a novel hybrid of the pyridine pathway and the pyrrolidine pathway. Characterization of the enzymes involved in the hybrid pathway is important for understanding its biochemical mechanism. Here, we report that the molybdenum-containing nicotine dehydrogenase (NdhAB), which catalyzes the initial step of nicotine degradation, is located in the periplasm of strain S33, while the 6-hydroxynicotine oxidase and 6-hydroxypseudooxynicoine oxidase are in the cytoplasm. This is consistent with the fact that NdhA has a Tat signal peptide. Interestingly, an open reading frame (ORF) adjacent to the gene was verified to encode a copper-containing electron carrier, pseudoazurin (Paz), which has a signal peptide typical of bacterial Paz proteins. Both were transported into the periplasm after being produced in the cytoplasm. We purified NdhAB from the periplasmic fraction of strain S33 and found that with Paz as the physiological electron acceptor, NdhAB catalyzed the hydroxylation of nicotine at a specific rate of 110.52 ± 8.09 μmol · min · mg of protein, where the oxygen atom in the hydroxyl group of the product 6-hydroxynicotine was derived from HO. The apparent values for nicotine and Paz were 1.64 ± 0.07 μM and 3.61 ± 0.23 μM, respectively. NAD(P), O, and ferredoxin could not serve as electron acceptors. Disruption of the gene disabled the strain for nicotine degradation, indicating that Paz is required for nicotine catabolism in the strain. These findings help our understanding of electron transfer during nicotine degradation in bacteria. Nicotine is a toxic and addictive -heterocyclic aromatic alkaloid produced in tobacco. Its catabolism in organisms and degradation in tobacco wastes have become major concerns for human health and the environment. Bacteria usually decompose nicotine using the classical strategy of hydroxylating the pyridine ring with the help of activated oxygen by nicotine dehydrogenase, which binds one molybdopterin, two [2Fe2S] clusters, and usually one flavin adenine dinucleotide (FAD) as well. However, the physiological electron acceptor for the reaction is still unknown. In this study, we found that the two-component nicotine dehydrogenase from S33, naturally lacking an FAD-binding domain, is located in the periplasmic space and uses a copper-containing electron carrier, pseudoazurin, as its physiological electron acceptor. We report here the role of pseudoazurin in a reaction catalyzed by a molybdopterin-containing hydroxylase occurring in the periplasmic space. These results provide new biochemical knowledge on microbial degradation of -heterocyclic aromatic compounds.
S33能够以尼古丁作为唯一的碳、氮和能量来源生长,通过吡啶途径和吡咯烷途径的一种新型杂合途径。对参与该杂合途径的酶进行表征对于理解其生化机制很重要。在此,我们报道含钼的尼古丁脱氢酶(NdhAB)催化尼古丁降解的第一步,位于菌株S33的周质中,而6-羟基尼古丁氧化酶和6-羟基假氧化尼古丁氧化酶位于细胞质中。这与NdhA具有Tat信号肽这一事实一致。有趣的是,与该基因相邻的一个开放阅读框(ORF)经证实编码一种含铜电子载体——假蓝蛋白(Paz),它具有典型的细菌Paz蛋白信号肽。两者在细胞质中产生后都被转运到周质中。我们从菌株S33的周质部分纯化了NdhAB,发现以Paz作为生理电子受体时,NdhAB以110.52±8.09μmol·min·mg蛋白的比速率催化尼古丁的羟基化反应,产物6-羟基尼古丁羟基中的氧原子来自H₂O。尼古丁和Paz的表观Km值分别为1.64±0.07μM和3.61±0.23μM。NAD(P)、O₂和铁氧还蛋白不能作为电子受体。该基因的破坏使菌株丧失尼古丁降解能力,表明Paz是该菌株尼古丁分解代谢所必需的。这些发现有助于我们理解细菌中尼古丁降解过程中的电子传递。尼古丁是烟草中产生的一种有毒且成瘾的含氮杂环芳香生物碱。其在生物体中的分解代谢以及在烟草废弃物中的降解已成为人类健康和环境的主要关注点。细菌通常利用尼古丁脱氢酶借助活性氧将吡啶环羟基化的经典策略来分解尼古丁,尼古丁脱氢酶结合一个钼蝶呤辅基、两个[2Fe2S]簇,通常还结合一个黄素腺嘌呤二核苷酸(FAD)。然而,该反应的生理电子受体仍然未知。在本研究中,我们发现来自S33的双组分尼古丁脱氢酶天然缺乏FAD结合结构域,位于周质空间,并使用含铜电子载体假蓝蛋白作为其生理电子受体。我们在此报道了假蓝蛋白在周质空间中由含钼蝶呤羟化酶催化反应中的作用。这些结果为含氮杂环芳香化合物的微生物降解提供了新的生化知识。