Meng Xiangli, Lu Shan, Lai Xin-He, Wang Yiting, Wen Yumeng, Jin Dong, Yang Jing, Xu Jianguo
State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Chinese Center for Disease Control and Prevention, Changping, Beijing 102206, PR China.
Department of Pediatrics & Institute of Translational Medicine, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou 325000, PR China.
Int J Syst Evol Microbiol. 2017 Jun;67(6):1873-1879. doi: 10.1099/ijsem.0.001884. Epub 2017 Jun 20.
Two strains (VUL4_1T and VUL4_2) of Gram-staining-positive, catalase-negative, non-spore-forming short rods were isolated from rectal swabs of Old World vultures (Gypaetus barbatus) in the Tibet-Qinghai Plateau, China. Analysis of morphological characteristics and biochemical tests indicated that the two strains closely resembled each other but were distinct from other species of the genus Actinomyces previously described. Based on the results of 16S rRNA gene sequence comparison and genome analysis, strains were determined to be members of the genus Actinomyces, closely related to the type strains of Actinomyces marimammalium (96.4 % 16S rRNA gene sequence similarity), Actinomyceshongkongensis (92.4 %), Actinomyceshordeovulneris (92.3 %) and Actinomycesnasicola (92.2 %), respectively. Optimal growth conditions were 37 °C, pH 6-7, with 1 % (w/v) NaCl. Strain VUL4_1T contained C18 : 1ω9c and C16 : 0 as the major cellular fatty acids and diphosphatidylglycerol as the major component of the polar lipids. The genomic DNA G+C content of VUL4_1T was 54.9 mol%. Strain VUL4_1T showed less than 70 % DNA-DNA relatedness with other species of the genus Actinomyces, further supporting strain VUL4_1T as a representative of a novel species. Based on the phenotypic data and phylogenetic inference, a novel species, Actinomyces liubingyangii sp. nov., is proposed with VUL4_1T (=CGMCC 4.7370T=DSM 104050T) as the type strain.
从中国青藏高原的旧大陆秃鹫(胡兀鹫)直肠拭子中分离出两株革兰氏染色阳性、过氧化氢酶阴性、无芽孢形成的短杆菌(VUL4_1T和VUL4_2)。形态学特征分析和生化试验表明,这两株菌彼此相似,但与先前描述的放线菌属其他物种不同。基于16S rRNA基因序列比较和基因组分析结果,确定这些菌株为放线菌属成员,分别与海生哺乳动物放线菌(16S rRNA基因序列相似性为96.4%)、香港放线菌(92.4%)、大麦致病放线菌(92.3%)和鼻放线菌(92.2%)的模式菌株密切相关。最适生长条件为37 °C、pH 6 - 7,含1%(w/v)NaCl。菌株VUL4_1T含有C18 : 1ω9c和C16 : 0作为主要细胞脂肪酸,二磷脂酰甘油作为极性脂质的主要成分。VUL4_1T的基因组DNA G+C含量为54.9 mol%。菌株VUL4_1T与放线菌属其他物种的DNA - DNA相关性低于70%,进一步支持菌株VUL4_1T作为一个新物种的代表。基于表型数据和系统发育推断,提出一个新物种,刘冰阳放线菌(Actinomyces liubingyangii sp. nov.),以VUL4_1T(=CGMCC 4.7370T=DSM 104050T)作为模式菌株。