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产生具有高度简并结构和广谱抗菌活性的防御素样细菌素(Actifensins)。

Produces Defensin-Like Bacteriocins (Actifensins) with a Highly Degenerate Structure and Broad Antimicrobial Activity.

机构信息

School of Microbiology, University College Cork, Cork, Ireland.

Teagasc Food Research Centre, Fermoy, Ireland.

出版信息

J Bacteriol. 2020 Jan 29;202(4). doi: 10.1128/JB.00529-19.

Abstract

We identified a strain of which produces a potent bacteriocin with activity against a broad range of Gram-positive bacteria, many of which are pathogenic to animals and humans. The bacteriocin was purified and found to have a mass of 4,091 ± 1 Da with a sequence of GFGCNLITSNPYQCSNHCKSVGYRGGYCKLRTVCTCY containing three disulfide bridges. Surprisingly, near relatives of actifensin were found to be a series of related eukaryotic defensins displaying greater than 50% identity to the bacteriocin. A pangenomic screen further revealed that production of actifensin-related bacteriocins is a common trait within the genus, with 47 being encoded in 161 genomes. Furthermore, these bacteriocins displayed a remarkable level of diversity with a mean amino acid identity of only 52% between strains/species. This level of redundancy suggests that this new class of bacteriocins may provide a very broad structural basis on which to deliver and design new broad-spectrum antimicrobials for treatment of animal and human infections. Bacteriocins (ribosomally produced antimicrobial peptides) are potential alternatives to current antimicrobials given the global challenge of antimicrobial resistance. We identified a novel bacteriocin from with no previously characterized antimicrobial activity. Using publicly available genomic data, we found a highly conserved yet divergent family of previously unidentified homologous peptide sequences within the genus with striking similarity to eukaryotic defensins. These actifensins may provide a potent line of antimicrobial defense/offense, and the machinery to produce them could be used for the design of new antimicrobials given the degeneracy that exists naturally in their structure.

摘要

我们从 中鉴定出一种产生强效细菌素的菌株,该细菌素对广泛的革兰氏阳性菌具有活性,其中许多对动物和人类具有致病性。该细菌素被纯化并发现其质量为 4091 ± 1Da,序列为 GFGCNLITSNPYQCSNHCKSVGYRGGYCKLRTVCTCY,包含三个二硫键。令人惊讶的是,发现 actifensin 的近缘物是一系列相关的真核防御素,与细菌素有超过 50%的同一性。全基因组筛选进一步表明,产生 actifensin 相关细菌素是该属的共同特征,在 161 个基因组中编码了 47 个。此外,这些细菌素显示出惊人的多样性,菌株/种之间的平均氨基酸同一性仅为 52%。这种冗余水平表明,这种新类别的细菌素可能为提供广泛的结构基础提供了可能,从而为治疗动物和人类感染提供新的广谱抗菌药物。细菌素(核糖体产生的抗菌肽)是当前抗菌药物的潜在替代品,因为全球范围内存在抗菌药物耐药性的挑战。我们从 中鉴定出一种新型细菌素,该细菌素以前没有被表征出具有抗菌活性。使用公开的基因组数据,我们在 属内发现了一个高度保守但又不同的以前未识别的同源肽序列家族,与真核防御素有惊人的相似性。这些 actifensins 可能提供了一种有效的抗菌防御/进攻手段,而且由于其结构中存在自然的简并性,用于生产它们的机制可以用于设计新的抗菌药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d5c/6989792/e852c60c67cd/JB.00529-19-f0001.jpg

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