Advanced Centre for Treatment, Research and Education in Cancer, Kharghar, Navi Mumbai, Maharashtra, 410 210, India.
Homi Bhabha National Institute, Training School Complex, Anushaktinagar, Mumbai, 400 094, India.
Sci Rep. 2017 Jun 20;7(1):3849. doi: 10.1038/s41598-017-03816-4.
BRCA1 associated ring domain protein 1(BARD1) is a tumor suppressor protein having a wide role in cellular processes like cell-cycle checkpoint, DNA damage repair and maintenance of genomic integrity. Germ-line mutation Gln 564 His discovered in linker region of BARD1 leads to loss of binding to Cleavage stimulating factor (CstF50), which in turn instigates the premature mRNA transcript formation and apoptosis. We have studied the dynamics of ARD domain present in the BARD1 wild-type and mutant protein in association with CstF50 using biophysical, biochemical and molecular dynamics simulations. It has been observed that the ARD domain is relatively more flexible than the BRCT domain of BARD1. Further relative orientations of both the ARD and BRCT domains varies due to the highly flexible nature of the connecting linker region present between the domains. It has been observed that mutant ARD domain is more dynamic in nature compared to wild-type protein. Molecular docking studies between BARD1 Gln 564 His mutant and CstF50 shows the loss of interactions. Furthermore, domain motion of ARD present in BARD1 was stabilized when complexed with CstF50.
BRCA1 相关的环指结构域蛋白 1(BARD1)是一种肿瘤抑制蛋白,在细胞周期检查点、DNA 损伤修复和维持基因组完整性等细胞过程中发挥广泛作用。在 BARD1 的连接区发现的胚系突变 Gln564His 导致与 Cleavage stimulating factor (CstF50) 的结合丧失,进而引发过早的 mRNA 转录形成和细胞凋亡。我们使用生物物理、生化和分子动力学模拟研究了与 CstF50 结合的 BARD1 野生型和突变蛋白中 ARD 结构域的动力学。结果表明,ARD 结构域比 BARD1 的 BRCT 结构域相对更灵活。此外,由于两个结构域之间存在高度灵活的连接区,因此两个 ARD 和 BRCT 结构域的相对取向会发生变化。结果表明,与野生型蛋白相比,突变的 ARD 结构域的性质更为动态。BARD1 Gln564His 突变体和 CstF50 之间的分子对接研究表明相互作用的丧失。此外,当与 CstF50 复合时,ARD 在 BARD1 中的结构域运动得到稳定。