Robbins John M, Souffrant Michael G, Hamelberg Donald, Gadda Giovanni, Bommarius Andreas S
School of Chemical and Biomolecular Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0100, United States.
Engineered Biosystems Building (EBB), Georgia Institute of Technology , Atlanta, Georgia 30332-2000, United States.
Biochemistry. 2017 Jul 25;56(29):3800-3807. doi: 10.1021/acs.biochem.7b00335. Epub 2017 Jul 11.
Flavins, including flavin adenine dinucleotide (FAD), are fundamental catalytic cofactors that are responsible for the redox functionality of a diverse set of proteins. Alternatively, modified flavin analogues are rarely found in nature as their incorporation typically results in inactivation of flavoproteins, thus leading to the disruption of important cellular pathways. Here, we report that the fungal flavoenzyme formate oxidase (FOX) catalyzes the slow conversion of noncovalently bound FAD to 8-formyl FAD and that this conversion results in a nearly 10-fold increase in formate oxidase activity. Although the presence of an enzyme-bound 8-formyl FMN has been reported previously as a result of site-directed mutagenesis studies of lactate oxidase, FOX is the first reported case of 8-formyl FAD in a wild-type enzyme. Therefore, the formation of the 8-formyl FAD cofactor in formate oxidase was investigated using steady-state kinetics, site-directed mutagenesis, ultraviolet-visible, circular dichroism, and fluorescence spectroscopy, liquid chromatography with mass spectrometry, and computational analysis. Surprisingly, the results from these studies indicate not only that 8-formyl FAD forms spontaneously and results in the active form of FOX but also that its autocatalytic formation is dependent on a nearby arginine residue, R87. Thus, this work describes a new enzyme cofactor and provides insight into the little-understood mechanism of enzyme-mediated 8α-flavin modifications.
黄素,包括黄素腺嘌呤二核苷酸(FAD),是基本的催化辅因子,负责多种蛋白质的氧化还原功能。相比之下,修饰的黄素类似物在自然界中很少见,因为它们的掺入通常会导致黄素蛋白失活,从而导致重要细胞途径的破坏。在这里,我们报告真菌黄素酶甲酸氧化酶(FOX)催化非共价结合的FAD缓慢转化为8-甲酰基FAD,并且这种转化导致甲酸氧化酶活性增加近10倍。尽管先前通过乳酸氧化酶的定点诱变研究报道了酶结合的8-甲酰基FMN的存在,但FOX是野生型酶中首次报道的8-甲酰基FAD的情况。因此,使用稳态动力学、定点诱变、紫外可见光谱、圆二色光谱和荧光光谱、液相色谱-质谱联用以及计算分析,对甲酸氧化酶中8-甲酰基FAD辅因子的形成进行了研究。令人惊讶的是,这些研究结果不仅表明8-甲酰基FAD自发形成并导致FOX的活性形式,而且其自催化形成依赖于附近的精氨酸残基R87。因此,这项工作描述了一种新的酶辅因子,并深入了解了酶介导的8α-黄素修饰这一鲜为人知的机制。