• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

CH/π 相互作用在碳水化合物识别中的作用。

CH/π Interactions in Carbohydrate Recognition.

机构信息

Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, Prague 6, 166 28, Czech Republic.

出版信息

Molecules. 2017 Jun 23;22(7):1038. doi: 10.3390/molecules22071038.

DOI:10.3390/molecules22071038
PMID:28644385
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6152320/
Abstract

Many carbohydrate-binding proteins contain aromatic amino acid residues in their binding sites. These residues interact with carbohydrates in a stacking geometry via CH/π interactions. These interactions can be found in carbohydrate-binding proteins, including lectins, enzymes and carbohydrate transporters. Besides this, many non-protein aromatic molecules (natural as well as artificial) can bind saccharides using these interactions. Recent computational and experimental studies have shown that carbohydrate-aromatic CH/π interactions are dispersion interactions, tuned by electrostatics and partially stabilized by a hydrophobic effect in solvated systems.

摘要

许多碳水化合物结合蛋白在其结合部位含有芳香族氨基酸残基。这些残基通过 CH/π 相互作用以堆积的方式与碳水化合物相互作用。这些相互作用存在于碳水化合物结合蛋白中,包括凝集素、酶和碳水化合物转运蛋白。除此之外,许多非蛋白质芳香族分子(天然的和人工的)也可以通过这些相互作用与糖结合。最近的计算和实验研究表明,碳水化合物-芳香族 CH/π 相互作用是色散相互作用,受静电调节,并在溶剂化体系中部分由疏水效应稳定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/09e56b36948a/molecules-22-01038-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/6bd0910ca7fc/molecules-22-01038-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/10438d4a78d7/molecules-22-01038-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/33ca736193d4/molecules-22-01038-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/09e56b36948a/molecules-22-01038-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/6bd0910ca7fc/molecules-22-01038-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/10438d4a78d7/molecules-22-01038-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/33ca736193d4/molecules-22-01038-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c9/6152320/09e56b36948a/molecules-22-01038-g004.jpg

相似文献

1
CH/π Interactions in Carbohydrate Recognition.CH/π 相互作用在碳水化合物识别中的作用。
Molecules. 2017 Jun 23;22(7):1038. doi: 10.3390/molecules22071038.
2
Stacking interactions between carbohydrate and protein quantified by combination of theoretical and experimental methods.通过理论和实验相结合的方法定量研究碳水化合物和蛋白质之间的堆积相互作用。
PLoS One. 2012;7(10):e46032. doi: 10.1371/journal.pone.0046032. Epub 2012 Oct 8.
3
Substituent effects in synthetic lectins--exploring the role of CH-π interactions in carbohydrate recognition.取代基效应对合成凝集素的影响——探究 CH-π 相互作用在糖识别中的作用。
J Org Chem. 2011 Aug 19;76(16):6548-57. doi: 10.1021/jo200755z. Epub 2011 Jul 18.
4
The importance of CH/pi interactions to the function of carbohydrate binding proteins.碳氢/π相互作用对碳水化合物结合蛋白功能的重要性。
Protein Pept Lett. 2002 Jun;9(3):195-209. doi: 10.2174/0929866023408751.
5
Carbohydrate-aromatic interactions.碳水化合物-芳环相互作用。
Acc Chem Res. 2013 Apr 16;46(4):946-54. doi: 10.1021/ar300024d. Epub 2012 Jun 15.
6
The CH-π Interaction in Protein-Carbohydrate Binding: Bioinformatics and In Vitro Quantification.蛋白质-碳水化合物结合中的 CH-π 相互作用:生物信息学和体外定量。
Chemistry. 2020 Aug 21;26(47):10769-10780. doi: 10.1002/chem.202000593. Epub 2020 Jul 27.
7
Molecular simulations of hevein/(GlcNAc)3 complex with weakened OH/O and CH/π hydrogen bonds: implications for their role in complex stabilization.具有减弱的OH/O和CH/π氢键的橡胶素/(GlcNAc)3复合物的分子模拟:对其在复合物稳定中作用的启示
Carbohydr Res. 2015 May 18;408:1-7. doi: 10.1016/j.carres.2015.02.012. Epub 2015 Mar 7.
8
Carbohydrate binding module recognition of xyloglucan defined by polar contacts with branching xyloses and CH-Π interactions.通过与分支木糖的极性接触和CH-Π相互作用定义的木葡聚糖的碳水化合物结合模块识别。
Proteins. 2014 Dec;82(12):3466-75. doi: 10.1002/prot.24700. Epub 2014 Oct 21.
9
Exploration of CH···π mediated stacking interactions in saccharide: aromatic residue complexes through conformational sampling.通过构象采样探索 saccharide:aromatic residue 复合物中 CH···π 介导的堆积相互作用。
Carbohydr Res. 2012 Nov 1;361:133-40. doi: 10.1016/j.carres.2012.08.015. Epub 2012 Sep 5.
10
Structural and energetic basis of carbohydrate-aromatic packing interactions in proteins.蛋白质中糖-芳基堆积相互作用的结构和能量基础。
J Am Chem Soc. 2013 Jul 3;135(26):9877-84. doi: 10.1021/ja4040472. Epub 2013 Jun 19.

引用本文的文献

1
Predicting receptor-ligand pairing preferences in plant-microbe interfaces via molecular dynamics and machine learning.通过分子动力学和机器学习预测植物-微生物界面中的受体-配体配对偏好
Comput Struct Biotechnol J. 2025 Jun 18;27:2782-2795. doi: 10.1016/j.csbj.2025.06.029. eCollection 2025.
2
Ionic Liquid-Modified Resorcinol Formaldehyde Resins: Synthesis and Applications to Methylene Blue Removal.离子液体改性间苯二酚甲醛树脂:合成及其在亚甲基蓝去除中的应用
Chemistry. 2025 Jul 11;31(39):e202500329. doi: 10.1002/chem.202500329. Epub 2025 Jun 25.
3
OsAPSE modulates non-covalent interactions between arabinogalactan protein -glycans and pectin in rice cell walls.

本文引用的文献

1
A thorough experimental study of CH/π interactions in water: quantitative structure-stability relationships for carbohydrate/aromatic complexes.水中CH/π相互作用的深入实验研究:碳水化合物/芳香族配合物的定量结构-稳定性关系
Chem Sci. 2015 Nov 1;6(11):6076-6085. doi: 10.1039/c5sc02108a. Epub 2015 Jul 30.
2
Carbohydrate-Aromatic Interactions in Proteins.蛋白质中的碳水化合物-芳香族相互作用
J Am Chem Soc. 2015 Dec 9;137(48):15152-60. doi: 10.1021/jacs.5b08424. Epub 2015 Nov 30.
3
Enhanced Aromatic Sequons Increase Oligosaccharyltransferase Glycosylation Efficiency and Glycan Homogeneity.
OsAPSE调节水稻细胞壁中阿拉伯半乳聚糖蛋白聚糖与果胶之间的非共价相互作用。
Front Plant Sci. 2025 May 22;16:1588802. doi: 10.3389/fpls.2025.1588802. eCollection 2025.
4
Synthesis of a multicomponent cellulose-based adsorbent for tetracycline removal from aquaculture water.用于从水产养殖水中去除四环素的多组分纤维素基吸附剂的合成。
Beilstein J Nanotechnol. 2025 May 27;16:728-739. doi: 10.3762/bjnano.16.56. eCollection 2025.
5
Purity improvement and efficient recovery of levoglucosan mist produced by fast pyrolysis of cellulose using corona discharge.利用电晕放电提高纤维素快速热解产生的左旋葡聚糖雾滴的纯度并实现高效回收。
RSC Adv. 2025 May 8;15(19):14876-14880. doi: 10.1039/d5ra01634g. eCollection 2025 May 6.
6
Flipping out: role of arginine in hydrophobic interactions and biological formulation design.出人意料:精氨酸在疏水相互作用及生物制剂设计中的作用
Chem Sci. 2025 Mar 11;16(16):6780-6792. doi: 10.1039/d4sc08672d. eCollection 2025 Apr 16.
7
Identification and Protein Engineering of Galactosidases for the Conversion of Blood Type B to Blood Type O.用于将B型血转化为O型血的半乳糖苷酶的鉴定与蛋白质工程
Chembiochem. 2025 Apr 1;26(7):e202500072. doi: 10.1002/cbic.202500072. Epub 2025 Mar 12.
8
The energetic landscape of CH-π interactions in protein-carbohydrate binding.蛋白质-碳水化合物结合中CH-π相互作用的能量景观。
Chem Sci. 2024 Dec 3;16(4):1746-1761. doi: 10.1039/d4sc06246a. eCollection 2025 Jan 22.
9
Synthetic molecular cage receptors for carbohydrate recognition.用于碳水化合物识别的合成分子笼状受体。
Nat Rev Chem. 2025 Jan;9(1):10-27. doi: 10.1038/s41570-024-00666-3. Epub 2024 Dec 9.
10
Insights into phosphoethanolamine cellulose synthesis and secretion across the Gram-negative cell envelope.洞悉革兰氏阴性菌细胞外膜中磷酸乙醇胺纤维素的合成与分泌。
Nat Commun. 2024 Sep 6;15(1):7798. doi: 10.1038/s41467-024-51838-0.
增强型芳香糖基化位点提高寡糖基转移酶的糖基化效率和聚糖同质性。
Chem Biol. 2015 Aug 20;22(8):1052-62. doi: 10.1016/j.chembiol.2015.06.017. Epub 2015 Jul 16.
4
Molecular simulations of hevein/(GlcNAc)3 complex with weakened OH/O and CH/π hydrogen bonds: implications for their role in complex stabilization.具有减弱的OH/O和CH/π氢键的橡胶素/(GlcNAc)3复合物的分子模拟:对其在复合物稳定中作用的启示
Carbohydr Res. 2015 May 18;408:1-7. doi: 10.1016/j.carres.2015.02.012. Epub 2015 Mar 7.
5
Energy decomposition analysis approaches and their evaluation on prototypical protein-drug interaction patterns.能量分解分析方法及其在典型蛋白-药物相互作用模式中的评价。
Chem Soc Rev. 2015 May 21;44(10):3177-211. doi: 10.1039/c4cs00375f. Epub 2015 Apr 2.
6
Statistical analysis of amino acids in the vicinity of carbohydrate residues performed by GlyVicinity.通过GlyVicinity对碳水化合物残基附近的氨基酸进行统计分析。
Methods Mol Biol. 2015;1273:215-26. doi: 10.1007/978-1-4939-2343-4_16.
7
Modulating weak interactions for molecular recognition: a dynamic combinatorial analysis for assessing the contribution of electrostatics to the stability of CH-π bonds in water.调节弱相互作用进行分子识别:评估静电对水中 CH-π 键稳定性贡献的动态组合分析。
Angew Chem Int Ed Engl. 2015 Mar 27;54(14):4344-8. doi: 10.1002/anie.201411733. Epub 2015 Feb 9.
8
Carbohydrate-protein interactions: molecular modeling insights.碳水化合物-蛋白质相互作用:分子模拟见解
Adv Carbohydr Chem Biochem. 2014;71:9-136. doi: 10.1016/B978-0-12-800128-8.00001-7.
9
Structural and energetic basis of carbohydrate-aromatic packing interactions in proteins.蛋白质中糖-芳基堆积相互作用的结构和能量基础。
J Am Chem Soc. 2013 Jul 3;135(26):9877-84. doi: 10.1021/ja4040472. Epub 2013 Jun 19.
10
A dynamic combinatorial approach for the analysis of weak carbohydrate/aromatic complexes: dissecting facial selectivity in CH/π stacking interactions.一种用于分析弱碳水化合物/芳环配合物的动态组合方法:解析 CH/π 堆积相互作用中的面选择性。
J Am Chem Soc. 2013 Mar 6;135(9):3347-50. doi: 10.1021/ja3120218. Epub 2013 Feb 25.