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活体 NMR 作为一种探测完整衣藻细胞中分子结构和动态的工具。

In vivo NMR as a tool for probing molecular structure and dynamics in intact Chlamydomonas reinhardtii cells.

机构信息

Department of Solid State NMR, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333CC, Leiden, The Netherlands.

Department of Biotechnology, University of Verona, Verona, Italy.

出版信息

Photosynth Res. 2018 Mar;135(1-3):227-237. doi: 10.1007/s11120-017-0412-9. Epub 2017 Jun 23.

Abstract

We report the application of NMR dynamic spectral editing for probing the structure and dynamics of molecular constituents in fresh, intact cells and in freshly prepared thylakoid membranes of Chlamydomonas reinhardtii (Cr.) green algae. For isotope labeling, wild-type Cr. cells were grown on C acetate-enriched minimal medium. 1D C J-coupling based and dipolar-based MAS NMR spectra were applied to distinguish C resonances of different molecular components. 1D spectra were recorded over a physiological temperature range, and whole-cell spectra were compared to those taken from thylakoid membranes, evaluating their composition and dynamics. A theoretical model for NMR polarization transfer was used to simulate the relative intensities of direct, J-coupling, and dipolar-based polarization from which the degree of lipid segmental order and rotational dynamics of the lipid acyl chains were estimated. We observe that thylakoid lipid signals dominate the lipid spectral profile of whole algae cells, demonstrating that with our novel method, thylakoid membrane characteristics can be detected with atomistic precision inside intact photosynthetic cells. The experimental procedure is rapid and applicable to fresh cell cultures, and could be used as an original approach for detecting chemical profiles, and molecular structure and dynamics of photosynthetic membranes in vivo in functional states.

摘要

我们报告了 NMR 动态光谱编辑在探测新鲜完整细胞和刚制备的莱茵衣藻(Chlamydomonas reinhardtii (Cr.))绿藻类囊体膜中分子成分的结构和动态方面的应用。对于同位素标记,野生型 Cr.细胞在富含 C 乙酸盐的最小培养基上生长。应用基于 1D C J 耦合和基于偶极子的 MAS NMR 光谱来区分不同分子成分的 C 共振。1D 光谱在生理温度范围内记录,并将全细胞光谱与类囊体膜的光谱进行比较,评估它们的组成和动态。我们使用了一个用于 NMR 极化转移的理论模型来模拟直接、J 耦合和基于偶极子的极化的相对强度,从中可以估计脂质片段有序度和脂质酰链的旋转动力学的程度。我们观察到类囊体脂质信号主导整个藻类细胞的脂质光谱轮廓,表明通过我们的新方法,可以在完整的光合细胞内以原子精度检测类囊体膜的特征。实验过程快速,适用于新鲜细胞培养物,并且可以作为一种原始方法用于检测光合作用膜的化学轮廓、分子结构和体内功能状态下的动态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15bd/5783995/5d940fd7bfbb/11120_2017_412_Fig1_HTML.jpg

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