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Direct Identification of Urinary Tract Pathogens from Urine Samples, Combining Urine Screening Methods and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.结合尿液筛查方法与基质辅助激光解吸电离飞行时间质谱法直接从尿液样本中鉴定尿路病原体
J Clin Microbiol. 2016 Apr;54(4):988-93. doi: 10.1128/JCM.02832-15. Epub 2016 Jan 27.
2
Direct Identification of Urinary Tract Pathogens From Urine Samples Using the Vitek MS System Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.基于基质辅助激光解吸电离飞行时间质谱的Vitek MS系统直接从尿液样本中鉴定尿路病原体
Ann Lab Med. 2015 Jul;35(4):416-22. doi: 10.3343/alm.2015.35.4.416. Epub 2015 May 21.
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Rapid urine preparation prior to identification of uropathogens by MALDI-TOF MS.在通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)鉴定尿路病原体之前进行快速尿液制备。
Eur J Clin Microbiol Infect Dis. 2015 Sep;34(9):1787-95. doi: 10.1007/s10096-015-2413-y. Epub 2015 Jun 9.
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MALDI-TOF MS for the diagnosis of infectious diseases.基质辅助激光解吸电离飞行时间质谱技术在感染性疾病诊断中的应用。
Clin Chem. 2015 Jan;61(1):100-11. doi: 10.1373/clinchem.2014.221770. Epub 2014 Oct 2.
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New procedure for rapid identification of microorganisms causing urinary tract infection from urine samples by mass spectrometry (MALDI-TOF).通过质谱法(基质辅助激光解吸电离飞行时间质谱,MALDI-TOF)从尿液样本中快速鉴定引起尿路感染的微生物的新方法。
Enferm Infecc Microbiol Clin. 2015 Feb;33(2):89-94. doi: 10.1016/j.eimc.2014.02.022. Epub 2014 May 3.
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Gram-stain plus MALDI-TOF MS (Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry) for a rapid diagnosis of urinary tract infection.革兰氏染色加基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)用于快速诊断尿路感染。
PLoS One. 2014 Jan 22;9(1):e86915. doi: 10.1371/journal.pone.0086915. eCollection 2014.
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Diafiltration MALDI-TOF mass spectrometry method for culture-independent detection and identification of pathogens directly from urine specimens.胶滤-基质辅助激光解析电离飞行时间质谱法用于直接从尿液标本中进行培养独立性检测和病原体鉴定。
Am J Clin Pathol. 2014 Feb;141(2):204-12. doi: 10.1309/AJCPQYW3B6JLKILC.
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Procedure for microbial identification based on Matrix-Assisted Laser Desorption/Ionization-Time of Flight Mass Spectrometry from screening-positive urine samples.基于基质辅助激光解吸/电离飞行时间质谱法对筛查呈阳性的尿液样本进行微生物鉴定的程序。
APMIS. 2014 Sep;122(9):790-5. doi: 10.1111/apm.12208. Epub 2013 Dec 10.
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Pretreatment of urine samples with SDS improves direct identification of urinary tract pathogens with matrix-assisted laser desorption ionization-time of flight mass spectrometry.用 SDS 预处理尿液样本可提高基质辅助激光解吸电离飞行时间质谱法对尿路感染病原体的直接鉴定。
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10
Direct identification of bacteria causing urinary tract infections by combining matrix-assisted laser desorption ionization-time of flight mass spectrometry with UF-1000i urine flow cytometry.采用基质辅助激光解吸电离飞行时间质谱与 UF-1000i 尿流细胞仪相结合直接鉴定尿路感染细菌。
J Microbiol Methods. 2013 Mar;92(3):231-5. doi: 10.1016/j.mimet.2012.12.016. Epub 2013 Jan 7.

用于布鲁克质谱仪直接检测尿路病原体的氢氧化钠-盐酸中和尿液制剂

NaOH-HCl neutralized urine preparation for direct testing of uropathogens by Bruker MS.

作者信息

Choi Ji Seon, Kim Jayoung, Kim Han-Soo, Kwon Chang-Wan, Kim Min-Sung, Choi Seong-Hyeok

机构信息

Department of Laboratory Medicine, International St. Mary's Hospital, Catholic Kwandong University, Incheon, Korea.

Institute for Integrative Medicine, International St. Mary's Hospital, Catholic Kwandong University, Incheon, Korea.

出版信息

J Clin Lab Anal. 2018 Mar;32(3). doi: 10.1002/jcla.22280. Epub 2017 Jun 26.

DOI:10.1002/jcla.22280
PMID:28649705
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6816833/
Abstract

BACKGROUND

We evaluated the analytical performance of a NaOH-HCl neutralization protocol for identifying uropathogens directly from urine samples by a Bruker MS system (Bruker Daltonics, German) and sought to establish a protocol for integrating the method with conventional screening.

METHODS

Among all urine samples requested for Gram staining, UF-1000i, and urine cultures by physicians, we selected samples that were positive by both Gram staining and UF-1000i testing. Urine was prepared by neutralization using 0.01M NaOH-HCl, and the samples were processed by Bruker MS. For the low detection limit, one strain each of Escherichia coli and Enterococcus faecium was inoculated in sterile deionized water and sterile urine specimens at sequential dilutions.

RESULTS

In a total of 1270 urine samples, 125 samples (9.8%) were positive by both Gram staining and UF-1000i. Of 94 samples showing a single morphotype on agar plates, 82 samples had colony counts ≥10  CFU/mL and most uropathogens (95.1%, 78 of 82) had UF-1000i counts ≥10  bacteria/mL. Among them, Bruker MS correctly identified 86.6% (71/82) of all isolates, 89.2% (66/74) of Gram-negative bacteria (GNB), and 62.5% (5/8) of Gram-positive cocci (GPC) with higher average scores for GPC (mean score 2.013) and GNB (mean score 2.110).

CONCLUSIONS

Bruker MS with urine preparation by NaOH-HCl neutralization provides a simple, cost-effective, and accurate method for identifying uropathogens directly from urine. Using Bruker MS when single morphotype Gram staining and the UF-1000i count as ≥10  bacteria/mL may improve the efficiency of bacterial identification in routine practice.

摘要

背景

我们评估了一种氢氧化钠-盐酸中和方案的分析性能,该方案用于通过布鲁克质谱系统(德国布鲁克道尔顿公司)直接从尿液样本中鉴定尿路病原体,并试图建立一种将该方法与传统筛查相结合的方案。

方法

在医生要求进行革兰氏染色、UF-1000i检测和尿培养的所有尿液样本中,我们选择了革兰氏染色和UF-1000i检测均为阳性的样本。尿液通过用0.01M氢氧化钠-盐酸中和制备,样本由布鲁克质谱仪处理。对于低检测限,将一株大肠杆菌和一株粪肠球菌分别接种于无菌去离子水和无菌尿液标本中,并进行连续稀释。

结果

在总共1270份尿液样本中,125份样本(9.8%)革兰氏染色和UF-1000i检测均为阳性。在94份在琼脂平板上显示单一形态型的样本中,82份样本的菌落计数≥10⁵CFU/mL,并且大多数尿路病原体(95.1%,82份中的78份)的UF-1000i计数≥10⁵细菌/mL。其中,布鲁克质谱仪正确鉴定了所有分离株的86.6%(71/82)、革兰氏阴性菌(GNB)的89.2%(66/74)和革兰氏阳性球菌(GPC)的62.5%(5/8),GPC的平均得分(平均得分2.013)和GNB的平均得分(平均得分2.110)更高。

结论

采用氢氧化钠-盐酸中和法制备尿液的布鲁克质谱仪为直接从尿液中鉴定尿路病原体提供了一种简单、经济有效且准确的方法。当单一形态型革兰氏染色且UF-1000i计数≥10⁵细菌/mL时使用布鲁克质谱仪可能会提高常规实践中细菌鉴定的效率。