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采用尺寸一致的多分区量子力学/分子力学方法模拟量子化学效应的阳离子溶剂化作用。

Cation solvation with quantum chemical effects modeled by a size-consistent multi-partitioning quantum mechanics/molecular mechanics method.

作者信息

Watanabe Hiroshi C, Kubillus Maximilian, Kubař Tomáš, Stach Robert, Mizaikoff Boris, Ishikita Hiroshi

机构信息

Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan.

Institute of Physical Chemistry and Center for Functional Nanostructures, Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 73131, Germany.

出版信息

Phys Chem Chem Phys. 2017 Jul 21;19(27):17985-17997. doi: 10.1039/c7cp01708a. Epub 2017 Jun 30.

Abstract

In the condensed phase, quantum chemical properties such as many-body effects and intermolecular charge fluctuations are critical determinants of the solvation structure and dynamics. Thus, a quantum mechanical (QM) molecular description is required for both solute and solvent to incorporate these properties. However, it is challenging to conduct molecular dynamics (MD) simulations for condensed systems of sufficient scale when adapting QM potentials. To overcome this problem, we recently developed the size-consistent multi-partitioning (SCMP) quantum mechanics/molecular mechanics (QM/MM) method and realized stable and accurate MD simulations, using the QM potential to a benchmark system. In the present study, as the first application of the SCMP method, we have investigated the structures and dynamics of Na, K, and Ca solutions based on nanosecond-scale sampling, a sampling 100-times longer than that of conventional QM-based samplings. Furthermore, we have evaluated two dynamic properties, the diffusion coefficient and difference spectra, with high statistical certainty. Furthermore the calculation of these properties has not previously been possible within the conventional QM/MM framework. Based on our analysis, we have quantitatively evaluated the quantum chemical solvation effects, which show distinct differences between the cations.

摘要

在凝聚相中,诸如多体效应和分子间电荷涨落等量子化学性质是溶剂化结构和动力学的关键决定因素。因此,溶质和溶剂都需要量子力学(QM)分子描述来纳入这些性质。然而,在采用QM势时,对足够规模的凝聚体系进行分子动力学(MD)模拟具有挑战性。为克服这一问题,我们最近开发了尺寸一致的多分区(SCMP)量子力学/分子力学(QM/MM)方法,并利用QM势对一个基准体系实现了稳定且精确的MD模拟。在本研究中,作为SCMP方法的首次应用,我们基于纳秒级采样研究了Na、K和Ca溶液的结构与动力学,该采样比传统基于QM的采样长100倍。此外,我们以高统计确定性评估了扩散系数和差谱这两个动力学性质。此外,在传统QM/MM框架内此前无法计算这些性质。基于我们的分析,我们对量子化学溶剂化效应进行了定量评估,结果表明阳离子之间存在明显差异。

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