Carson Domonique A, Barkema Herman W, Naushad Sohail, De Buck Jeroen
Department of Production Animal Health, Faculty of Veterinary Medicine, University of Calgary, Calgary, AB, Canada.
Department of Production Animal Health, Faculty of Veterinary Medicine, University of Calgary, Calgary, AB, Canada
Appl Environ Microbiol. 2017 Aug 17;83(17). doi: 10.1128/AEM.01015-17. Print 2017 Sep 1.
Non- staphylococci (NAS), the bacteria most commonly isolated from the bovine udder, potentially protect the udder against infection by major mastitis pathogens due to bacteriocin production. In this study, we determined the inhibitory capability of 441 bovine NAS isolates (comprising 26 species) against bovine Furthermore, inhibiting isolates were tested against a human methicillin-resistant (MRSA) isolate using a cross-streaking method. We determined the presence of bacteriocin clusters in NAS whole genomes using genome mining tools, BLAST, and comparison of genomes of closely related inhibiting and noninhibiting isolates and determined the genetic organization of any identified bacteriocin biosynthetic gene clusters. Forty isolates from 9 species (, , , , , , , , and ) inhibited growth of , 23 isolates of which, from , , , , , and , also inhibited MRSA. One hundred five putative bacteriocin gene clusters encompassing 6 different classes (lanthipeptides, sactipeptides, lasso peptides, class IIa, class IIc, and class IId) in 95 whole genomes from 16 species were identified. A total of 25 novel bacteriocin precursors were described. In conclusion, NAS from bovine mammary glands are a source of potential bacteriocins, with >21% being possible producers, representing potential for future characterization and prospective clinical applications. Mastitis (particularly infections caused by ) costs Canadian dairy producers $400 million/year and is the leading cause of antibiotic use on dairy farms. With increasing antibiotic resistance and regulations regarding use, there is impetus to explore bacteriocins (bacterially produced antimicrobial peptides) for treatment and prevention of bacterial infections. We examined the ability of 441 NAS bacteria from Canadian bovine milk samples to inhibit growth of in the laboratory. Overall, 9% inhibited growth of and 58% of those also inhibited MRSA. In NAS whole-genome sequences, we identified >21% of NAS as having bacteriocin genes. Our study represents a foundation to further explore NAS bacteriocins for clinical use.
非葡萄球菌(NAS)是最常从奶牛乳房中分离出的细菌,由于其能产生细菌素,可能会保护乳房免受主要乳腺炎病原体的感染。在本研究中,我们测定了441株牛源NAS分离株(包括26个物种)对牛源金黄色葡萄球菌的抑制能力。此外,使用交叉划线法对具有抑制作用的分离株进行了针对人耐甲氧西林金黄色葡萄球菌(MRSA)分离株的测试。我们使用基因组挖掘工具、BLAST以及对密切相关的具有抑制作用和无抑制作用的分离株的基因组进行比较,来确定NAS全基因组中细菌素簇的存在,并确定任何已鉴定的细菌素生物合成基因簇的遗传组织。来自9个物种(嗜麦芽窄食单胞菌、溶血不动杆菌、鲍曼不动杆菌、洋葱伯克霍尔德菌、产吲哚金黄杆菌、嗜皮菌属、库克菌属、寡养单胞菌属和嗜麦芽寡养单胞菌)的40株分离株抑制了金黄色葡萄球菌的生长,其中23株来自嗜麦芽窄食单胞菌、溶血不动杆菌、鲍曼不动杆菌、洋葱伯克霍尔德菌、产吲哚金黄杆菌和嗜皮菌属的分离株也抑制了MRSA的生长。在来自16个物种的95个全基因组中,鉴定出105个推定的细菌素基因簇,涵盖6个不同类别(羊毛硫肽、硫肽、套索肽、IIa类、IIc类和IId类)。总共描述了25种新型细菌素前体。总之,来自奶牛乳腺的NAS是潜在细菌素的来源,超过21%可能是生产者,这代表了未来进行特性鉴定和临床应用的潜力。乳腺炎(特别是由金黄色葡萄球菌引起的感染)每年给加拿大乳制品生产商造成4亿美元的损失,并且是奶牛场使用抗生素的主要原因。随着抗生素耐药性的增加和使用规定的出台,有动力探索细菌素(细菌产生的抗菌肽)用于治疗和预防细菌感染。我们在实验室中检测了441株来自加拿大牛奶样本的NAS细菌抑制金黄色葡萄球菌生长的能力。总体而言,9%的菌株抑制了金黄色葡萄球菌的生长,其中58%的菌株也抑制了MRSA的生长。在NAS全基因组序列中,我们鉴定出超过21%的NAS具有细菌素基因。我们的研究为进一步探索用于临床的NAS细菌素奠定了基础。