• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

两种澳大利亚石蝇的线粒体基因组,具有 Chauliodinae 的进化时间尺度。

Mitochondrial genomes of two Australian fishflies with an evolutionary timescale of Chauliodinae.

机构信息

Department of Entomology, China Agricultural University, Beijing, 100193, China.

出版信息

Sci Rep. 2017 Jun 30;7(1):4481. doi: 10.1038/s41598-017-04799-y.

DOI:10.1038/s41598-017-04799-y
PMID:28667281
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5493631/
Abstract

Fishflies (Corydalidae: Chauliodinae) with a total of ca. 130 extant species are one of the major groups of the holometabolous insect order Megaloptera. As a group which originated during the Mesozoic, the phylogeny and historical biogeography of fishflies are of high interest. The previous hypothesis on the evolutionary history of fishflies was based primarily on morphological data. To further test the existing phylogenetic relationships and to understand the divergence pattern of fishflies, we conducted a molecule-based study. We determined the complete mitochondrial (mt) genomes of two Australian fishfly species, Archichauliodes deceptor Kimmins, 1954 and Protochauliodes biconicus Kimmins, 1954, both members of a major subgroup of Chauliodinae with high phylogenetic significance. A phylogenomic analysis was carried out based on 13 mt protein coding genes (PCGs) and two rRNAs genes from the megalopteran species with determined mt genomes. Both maximum likelihood and Bayesian inference analyses recovered the Dysmicohermes clade as the sister group of the Archichauliodes clade + the Protochauliodes clade, which is consistent with the previous morphology-based hypothesis. The divergence time estimation suggested that the divergence among the three major subgroups of fishflies occurred during the Late Jurassic and Early Cretaceous when the supercontinent Pangaea was undergoing sequential breakup.

摘要

鱼蛉(Corydalidae:Chauliodinae)共有约 130 种现存物种,是完全变态昆虫目蜉蝣目(Megaloptera)的主要类群之一。作为起源于中生代的一个群体,鱼蛉的系统发育和历史生物地理学具有很高的研究价值。以前关于鱼蛉进化历史的假说主要基于形态学数据。为了进一步检验现有的系统发育关系,并了解鱼蛉的分化模式,我们进行了一项基于分子的研究。我们测定了两种澳大利亚鱼蛉物种——Archichauliodes deceptor Kimmins,1954 和 Protochauliodes biconicus Kimmins,1954 的完整线粒体(mt)基因组。这两个物种均属于 Chauliodinae 的一个主要亚群,具有重要的系统发育意义。基于已确定 mt 基因组的蜉蝣物种的 13 个 mt 蛋白编码基因(PCGs)和 2 个 rRNAs 基因,进行了系统基因组分析。最大似然和贝叶斯推断分析都恢复了 Dysmicohermes 分支是 Archichauliodes 分支和 Protochauliodes 分支的姐妹群,这与以前基于形态学的假说一致。分歧时间估计表明,这三个主要鱼蛉亚群的分歧发生在晚侏罗世和早白垩世期间,当时超大陆泛大陆(Pangaea)正在经历连续的分裂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/4c6fb6072cfd/41598_2017_4799_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/91c69ce80206/41598_2017_4799_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/9486cf43094b/41598_2017_4799_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/9c58efde991c/41598_2017_4799_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/632d61f3c2a3/41598_2017_4799_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/fbcddcf3911e/41598_2017_4799_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/df2af57a9ca5/41598_2017_4799_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/4baa9fc0d33a/41598_2017_4799_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/4c6fb6072cfd/41598_2017_4799_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/91c69ce80206/41598_2017_4799_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/9486cf43094b/41598_2017_4799_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/9c58efde991c/41598_2017_4799_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/632d61f3c2a3/41598_2017_4799_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/fbcddcf3911e/41598_2017_4799_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/df2af57a9ca5/41598_2017_4799_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/4baa9fc0d33a/41598_2017_4799_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbe0/5493631/4c6fb6072cfd/41598_2017_4799_Fig8_HTML.jpg

相似文献

1
Mitochondrial genomes of two Australian fishflies with an evolutionary timescale of Chauliodinae.两种澳大利亚石蝇的线粒体基因组,具有 Chauliodinae 的进化时间尺度。
Sci Rep. 2017 Jun 30;7(1):4481. doi: 10.1038/s41598-017-04799-y.
2
Early evolution and historical biogeography of fishflies (Megaloptera: Chauliodinae): implications from a phylogeny combining fossil and extant taxa.鱼类昆虫(长翅目:Chauliodinae)的早期进化和历史生物地理学:结合化石和现生物种的系统发育分析的启示。
PLoS One. 2012;7(7):e40345. doi: 10.1371/journal.pone.0040345. Epub 2012 Jul 6.
3
The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera.鱼类亚科 Chauliodinae 的首个线粒体基因组及其对长翅目更高系统发育的影响。
PLoS One. 2012;7(10):e47302. doi: 10.1371/journal.pone.0047302. Epub 2012 Oct 9.
4
The first mitochondrial genome for caddisfly (insecta: Trichoptera) with phylogenetic implications.具系统发育意义的蜉蝣目(昆虫纲:蜉蝣目)线粒体基因组的首个研究。
Int J Biol Sci. 2013 Dec 13;10(1):53-63. doi: 10.7150/ijbs.7975. eCollection 2013.
5
The complete mitochondrial genome of a fishfly, Dysmicohermes ingens (Chandler) (Megaloptera: Corydalidae: Chauliodinae).一种大型鱼蛉(Dysmicohermes ingens (Chandler))(广翅目:齿蛉科:齿蛉亚科)的完整线粒体基因组。
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1092-3. doi: 10.3109/19401736.2014.930837. Epub 2014 Jun 30.
6
Similar pattern, different paths: tracing the biogeographical history of Megaloptera (Insecta: Neuropterida) using mitochondrial phylogenomics.相似的模式,不同的路径:利用线粒体系统基因组学追踪广翅目昆虫(昆虫纲:脉翅目)的生物地理学历史。
Cladistics. 2022 Jun;38(3):374-391. doi: 10.1111/cla.12494. Epub 2021 Nov 24.
7
The phylogeny and evolutionary timescale of stoneflies (Insecta: Plecoptera) inferred from mitochondrial genomes.基于线粒体基因组推断的石蝇(昆虫纲:蜉蝣目)的系统发育和进化时间尺度。
Mol Phylogenet Evol. 2019 Jun;135:123-135. doi: 10.1016/j.ympev.2019.03.005. Epub 2019 Mar 12.
8
Gene Selection and Evolutionary Modeling Affect Phylogenomic Inference of Neuropterida Based on Transcriptome Data.基于转录组数据的神经翅目系统发育推断中基因选择和进化建模的影响。
Int J Mol Sci. 2019 Mar 1;20(5):1072. doi: 10.3390/ijms20051072.
9
Complete mitochondrial genomes of two Oriental dobsonflies, Neoneuromus tonkinensis (van der Weele) and Nevromus exterior (Navás) (Megaloptera: Corydalidae), and phylogenetic implications of Corydalinae.两种东方齿蛉(东京新脉齿蛉(Neoneuromus tonkinensis (van der Weele))和外新脉齿蛉(Nevromus exterior (Navás)))的线粒体全基因组及齿蛉亚科的系统发育意义(广翅目:齿蛉科)
Zootaxa. 2015 May 29;3964(1):44-62. doi: 10.11646/zootaxa.3964.1.2.
10
The complete mitochondrial genome of Vanessa indica and phylogenetic analyses of the family Nymphalidae.苎麻珍蝶的完整线粒体基因组及蛱蝶科系统发育分析
Genes Genomics. 2018 Oct;40(10):1011-1022. doi: 10.1007/s13258-018-0709-x. Epub 2018 Jun 14.

本文引用的文献

1
SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information.SequenceMatrix:用于快速组装具有字符集和密码子信息的多基因数据集的拼接软件。
Cladistics. 2011 Apr;27(2):171-180. doi: 10.1111/j.1096-0031.2010.00329.x.
2
Mitochondrial phylogenomics illuminates the evolutionary history of Neuropterida.线粒体系统发育基因组学揭示了脉翅目的进化历史。
Cladistics. 2017 Dec;33(6):617-636. doi: 10.1111/cla.12186. Epub 2016 Dec 23.
3
Complete mitochondrial genomes of two Oriental dobsonflies, Neoneuromus tonkinensis (van der Weele) and Nevromus exterior (Navás) (Megaloptera: Corydalidae), and phylogenetic implications of Corydalinae.
两种东方齿蛉(东京新脉齿蛉(Neoneuromus tonkinensis (van der Weele))和外新脉齿蛉(Nevromus exterior (Navás)))的线粒体全基因组及齿蛉亚科的系统发育意义(广翅目:齿蛉科)
Zootaxa. 2015 May 29;3964(1):44-62. doi: 10.11646/zootaxa.3964.1.2.
4
The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera.鱼类亚科 Chauliodinae 的首个线粒体基因组及其对长翅目更高系统发育的影响。
PLoS One. 2012;7(10):e47302. doi: 10.1371/journal.pone.0047302. Epub 2012 Oct 9.
5
Early evolution and historical biogeography of fishflies (Megaloptera: Chauliodinae): implications from a phylogeny combining fossil and extant taxa.鱼类昆虫(长翅目:Chauliodinae)的早期进化和历史生物地理学:结合化石和现生物种的系统发育分析的启示。
PLoS One. 2012;7(7):e40345. doi: 10.1371/journal.pone.0040345. Epub 2012 Jul 6.
6
Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses.Partitionfinder:用于系统发育分析的分区方案和替代模型的联合选择。
Mol Biol Evol. 2012 Jun;29(6):1695-701. doi: 10.1093/molbev/mss020. Epub 2012 Jan 20.
7
The architecture and complete sequence of mitochondrial genome of an assassin bug Agriosphodrus dohrni (Hemiptera: Reduviidae).一种猎蝽科昆虫(半翅目:猎蝽科)Agriosphodrus dohrni 的线粒体基因组的结构和全序列。
Int J Biol Sci. 2011;7(6):792-804. doi: 10.7150/ijbs.7.792. Epub 2011 Jul 1.
8
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.MEGA5:用于最大似然法、进化距离法和最大简约法的分子进化遗传学分析。
Mol Biol Evol. 2011 Oct;28(10):2731-9. doi: 10.1093/molbev/msr121. Epub 2011 May 4.
9
Insect mitochondrial genomics 3: the complete mitochondrial genome sequences of representatives from two neuropteroid orders: a dobsonfly (order Megaloptera) and a giant lacewing and an owlfly (order Neuroptera).昆虫线粒体基因组学3:两个脉翅目昆虫代表的线粒体基因组全序列:一种泥蛉(广翅目)、一种大型草蛉和一种蝶角蛉(脉翅目)
Genome. 2009 Jan;52(1):31-8. doi: 10.1139/G08-098.
10
A rapid bootstrap algorithm for the RAxML Web servers.一种用于RAxML网络服务器的快速自引导算法。
Syst Biol. 2008 Oct;57(5):758-71. doi: 10.1080/10635150802429642.