Shimizu Seishi, Smith Paul E
York Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.
Department of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas, 66506-0401, USA.
Chemphyschem. 2017 Aug 18;18(16):2243-2249. doi: 10.1002/cphc.201700503. Epub 2017 Jul 5.
Life in the deep sea exposes enzymes to high hydrostatic pressure, which decreases their stability. For survival, deep sea organisms tend to accumulate various osmolytes, most notably trimethylamine N-oxide used by fish, to counteract pressure denaturation. However, exactly how these osmolytes work remains unclear. Here, a rigorous statistical thermodynamics approach is used to clarify the mechanism of osmoprotection. It is shown that the weak, nonspecific, and dynamic interactions of water and osmolytes with proteins can be characterized only statistically, and that the competition between protein-osmolyte and protein-water interactions is crucial in determining conformational stability. Osmoprotection is driven by a stronger exclusion of osmolytes from the denatured protein than from the native conformation, and water distribution has no significant effect on these changes at low osmolyte concentrations.
深海中的生命使酶暴露于高静水压力之下,这会降低它们的稳定性。为了生存,深海生物倾向于积累各种渗透溶质,最显著的是鱼类使用的三甲胺 N-氧化物,以对抗压力变性。然而,这些渗透溶质的确切作用机制仍不清楚。在此,采用了一种严谨的统计热力学方法来阐明渗透保护的机制。结果表明,水和渗透溶质与蛋白质之间微弱、非特异性和动态的相互作用只能通过统计学来表征,并且蛋白质-渗透溶质相互作用与蛋白质-水相互作用之间的竞争对于确定构象稳定性至关重要。渗透保护是由变性蛋白质比天然构象更强烈地排斥渗透溶质所驱动的,并且在低渗透溶质浓度下,水的分布对这些变化没有显著影响。