Department of Chemical Sciences, University of Naples Federico II, Via Cintia 26, 80126 Naples, Italy.
Department of Chemistry and Chemical Biology, Biophysical Chemistry, TU Dortmund University, Otto-Hahn-Str. 4a, 44227 Dortmund, Germany.
Int J Biol Macromol. 2024 Jan;255:128119. doi: 10.1016/j.ijbiomac.2023.128119. Epub 2023 Nov 15.
Deep-sea organisms must cope with high hydrostatic pressures (HHP) up to the kbar regime to control their biomolecular processes. To alleviate the adverse effects of HHP on protein stability most organisms use high amounts of osmolytes. Little is known about the effects of these high concentrations on ligand binding. We studied the effect of the deep-sea osmolytes trimethylamine-N-oxide, glycine, and glycine betaine on the binding between lysozyme and the tri-saccharide NAG3, employing experimental and theoretical tools to reveal the combined effect of osmolytes and HHP on the conformational dynamics, hydration changes, and thermodynamics of the binding process. Due to their different chemical makeup, these cosolutes modulate the protein-sugar interaction in different ways, leading to significant changes in the binding constant and its pressure dependence. These findings suggest that deep-sea organisms may down- and up-regulate reactions in response to HHP stress by altering the concentration and type of the intracellular osmolyte.
深海生物必须应对高达千巴的高静水压力(HHP)以控制其生物分子过程。为了减轻 HHP 对蛋白质稳定性的不利影响,大多数生物使用大量的渗透剂。关于这些高浓度对配体结合的影响知之甚少。我们使用实验和理论工具研究了深海渗透剂三甲胺 N-氧化物、甘氨酸和甘氨酸甜菜碱对溶菌酶与三糖 NAG3 之间结合的影响,揭示了渗透剂和 HHP 对结合过程构象动力学、水合变化和热力学的综合影响。由于它们的化学组成不同,这些共溶剂以不同的方式调节蛋白质-糖相互作用,导致结合常数及其压力依赖性发生显著变化。这些发现表明,深海生物可能通过改变细胞内渗透物的浓度和类型来下调和上调反应以应对 HHP 应激。