Grzywacz Andrzej, Wyborska Dominika, Piwczyński Marcin
Chair of Ecology and Biogeography, Nicolaus Copernicus University, Toruń, Poland.
Chair of Ecology and Biogeography, Nicolaus Copernicus University, Toruń, Poland.
Forensic Sci Int. 2017 Sep;278:106-114. doi: 10.1016/j.forsciint.2017.06.023. Epub 2017 Jun 29.
In forensic entomology practice, species identification is a prerequisite for any further analysis of collected material. Although morphology-based taxonomy may be hindered by a range of factors, these are not obstacles for a molecular identification approach, so-called DNA barcoding. The Fanniidae are a dipteran family that is attracted to and breeds in decomposing animal carrion and dead human bodies. However, morphological identification of fanniids, both at adult and immature stages, is considered to be difficult, particularly for non-experts. We investigated the usefulness of molecular taxonomy methods as an alternative/supplement for morphology-based identification in European Fanniidae of forensic interest. The material used in this study was collected from various regions in Asia, Europe and North America. We sequenced a barcode region of the mitochondrial cytochrome c oxidase subunit I (COI) in 27 species. For 13 species, including some taxa breeding in dead bodies, this study describes COI sequences for the first time. Our analysis revealed that both mini-barcode and full-length COI barcode sequences give very high specimen identification success. Despite the large number of COI barcode sequences referring to Fanniidae in the BOLD and GenBank databases, previous identification of forensically relevant Fanniidae was hindered by uneven taxonomic sampling. The majority of available sequences refer to species that are not of medico-legal interest, and many species of forensic interest are unrepresented or represented only by a single sequence. Because of erroneous data that are present in depository databases, DNA barcoding must be used with caution and cannot be considered to be the sole alternative to other identification methods. Wolbachia infections in the examined material did not disrupt specimen identification. The obtained results will facilitate precise identification of European Fanniidae of forensic interest, badly preserved material with degraded DNA, as well as matching of unidentified females and immature stages to already described specimens.
在法医昆虫学实践中,物种鉴定是对收集到的材料进行任何进一步分析的前提。尽管基于形态学的分类法可能会受到一系列因素的阻碍,但这些对于分子鉴定方法(即所谓的DNA条形码技术)而言并非障碍。厕蝇科是双翅目下的一个科,被腐烂的动物尸体和人类尸体所吸引并在其中繁殖。然而,厕蝇在成虫和幼虫阶段的形态鉴定都被认为很困难,尤其是对于非专业人员来说。我们研究了分子分类学方法作为欧洲具有法医意义的厕蝇科基于形态学鉴定的替代/补充方法的实用性。本研究中使用的材料是从亚洲、欧洲和北美的不同地区收集的。我们对27个物种的线粒体细胞色素c氧化酶亚基I(COI)的一个条形码区域进行了测序。对于13个物种,包括一些在尸体中繁殖的分类单元,本研究首次描述了其COI序列。我们的分析表明,微型条形码和全长COI条形码序列都能非常成功地鉴定标本。尽管在BOLD和GenBank数据库中有大量关于厕蝇科的COI条形码序列,但之前对具有法医相关性的厕蝇科的鉴定受到分类采样不均衡的阻碍。大多数可用序列涉及的物种并非具有法医学意义,许多具有法医意义的物种没有代表性或仅由单个序列代表。由于保藏数据库中存在错误数据,DNA条形码技术必须谨慎使用,不能被视为其他鉴定方法的唯一替代方法。所检测材料中的沃尔巴克氏体感染并未干扰标本鉴定。所获得的结果将有助于精确鉴定欧洲具有法医意义的厕蝇科、DNA降解的保存不佳的材料,以及将未鉴定的雌性和幼虫阶段与已描述的标本进行匹配。